Variant
Genome | Chromosome | Position | VCF ID | Ref | Alt | mRNA Change | mRNA Info | GRCh37 | chr19 | 54803288 | . | A | C | CCDS12887.1:NM_006865.3:c.389cTg>cGg_NP_006856.3:p.130L>R | Homo sapiens leukocyte immunoglobulin-like receptor, subfamily A (without TM domain), member 3 (LILRA3), transcript variant 1, mRNA. |
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PDB
Entity | Residue | Monomer | BioUnit | Ligand | View | ||||||||||||||||||
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PDB | Entity | Uniprot | Identity | Evalue | ExpMethod | Date | Name | Label | Auth | ASA | rASA | SS | φ | ψ | ASA | rASA | ΔASA | Interaction | Name | Distance | Atom(p) | Atom(l) | |
6zdx | 2 | A0A0G2JQ46 | 85.71 | 0.0 |
X-RAY |
2020-07-22 | GLN | B:138 | B:107 | 71.0 | 0.394 | E | -114.6 | 122.1 | 71.0 | 0.394 | 0.0 | ||||||
6aee | 4 | A0A0G2JQ44 | 86.22 | 0.0 |
X-RAY |
2019-07-31 | GLN | G:106 | G:107 | 49.0 | 0.272 | E | -126.9 | 135.0 | 49.0 | 0.272 | 0.0 | ||||||
GLN | H:106 | H:107 | 83.0 | 0.461 | E | -145.0 | 137.1 | NA | NA | NA | |||||||||||||
6aed | 1 | Q8N423 | 81.36 | 0.0 |
X-RAY |
2019-07-31 | GLN | A:106 | A:107 | 72.0 | 0.4 | E | -99.0 | 123.0 | 72.0 | 0.4 | 0.0 | ||||||
3d2u | 3 | Q8NHL6 | 88.38 | 3e-121 |
X-RAY |
2008-07-08 | GLN | C:107 | D:107 | 73.0 | 0.406 | S | -45.5 | -79.7 | 73.0 | 0.406 | 0.0 |
HOH |
5.598 |
N |
O |
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GLN | F:107 | H:107 | 115.0 | 0.639 | S | -49.2 | -59.0 | NA | NA | NA | |||||||||||||
6k60 | 4 | A0A0G2JQ44 | 88.78 | 5e-121 |
X-RAY |
2019-11-27 | GLN | D:108 | NA:NA | DO | NA | DO | DO | DO | NA | NA | NA | ||||||
GLN | H:108 | NA:NA | DO | NA | DO | DO | DO | NA | NA | NA | |||||||||||||
1g0x | 1 | Q8NHL6 | 88.78 | 9e-121 |
X-RAY |
2001-01-17 | GLN | A:106 | A:107 | 85.0 | 0.472 | E | -112.0 | 123.9 | 85.0 | 0.472 | 0.0 |
HOH |
2.399 |
OE1 |
O |
||
1p7q | 4 | Q8NHL6 | 88.78 | 9e-121 |
X-RAY |
2003-10-14 | GLN | D:106 | D:107 | 70.0 | 0.389 | E | -87.3 | 123.8 | 70.0 | 0.389 | 0.0 | ||||||
1ufu | 1 | Q8NHL6 | 88.78 | 9e-121 |
X-RAY |
2004-08-10 | GLN | A:106 | A:107 | 78.0 | 0.433 | E | -114.8 | 117.3 | 78.0 | 0.433 | 0.0 | ||||||
1ugn | 1 | Q8NHL6 | 87.88 | 2e-120 |
X-RAY |
2004-08-10 | GLN | A:107 | A:107 | 69.0 | 0.383 | E | -126.3 | 132.7 | 69.0 | 0.383 | 0.0 |
HOH |
2.652 |
NE2 |
O |
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4no0 | 4 | Q8NHL6 | 88.72 | 2e-120 |
X-RAY |
2014-11-19 | GLN | D:104 | D:107 | 81.0 | 0.45 | E | -123.7 | 131.7 | 81.0 | 0.45 | 0.0 |
HOH |
4.434 |
O |
O |
||
6ewa | 4 | D9IDM8 | 88.72 | 2e-120 |
X-RAY |
2018-11-07 | GLN | D:104 | D:107 | 82.0 | 0.456 | E | -129.6 | 125.6 | 82.0 | 0.456 | 0.0 | ||||||
GLN | H:104 | H:107 | 78.0 | 0.433 | E | -126.0 | 122.8 | NA | NA | NA | |||||||||||||
6ewc | 4 | A0A0G2JQ44 | 88.72 | 2e-120 |
X-RAY |
2018-11-07 | GLN | D:104 | D:107 | 81.0 | 0.45 | E | -98.6 | 124.9 | 81.0 | 0.45 | 0.0 | ||||||
GLN | H:104 | H:107 | 82.0 | 0.456 | E | -98.1 | 124.6 | NA | NA | NA | |||||||||||||
6ewo | 4 | D9IDM8 | 88.72 | 2e-120 |
X-RAY |
2018-11-07 | GLN | D:104 | D:107 | 79.0 | 0.439 | E | -118.8 | 129.7 | 79.0 | 0.439 | 0.0 |
HOH |
4.810 |
O |
O |
||
GLN | H:104 | H:107 | 86.0 | 0.478 | E | -127.2 | 123.7 | NA | NA | NA | |||||||||||||
1vdg | 1 | Q8NHL6 | 88.27 | 3e-120 |
X-RAY |
2005-08-02 | GLN | A:107 | A:107 | 93.0 | 0.517 | E | -111.4 | 124.9 | 93.0 | 0.517 | 0.0 |
HOH |
4.270 |
C |
O |
||
GLN | B:107 | B:107 | 76.0 | 0.422 | E | -129.4 | 92.6 | 76.0 | 0.422 | 0.0 |
HOH |
3.560 |
OE1 |
O |
|||||||||
5knm | 3 | Q8NHL6 | 87.88 | 3e-120 |
X-RAY |
2017-06-14 | GLN | C:176 | D:107 | 95.0 | 0.528 | S | -74.6 | -167.6 | 95.0 | 0.528 | 0.0 | ||||||
2otp | 1 | Q8N149 | 83.84 | 4e-112 |
X-RAY |
2008-02-19 | LEU | A:105 | A:105 | 59.0 | 0.347 | E | -115.3 | 125.2 | 59.0 | 0.347 | 0.0 |
HOH |
7.044 |
O |
O |
||
LEU | B:105 | B:105 | 74.0 | 0.435 | E | -85.9 | 140.2 | 74.0 | 0.435 | 0.0 |
HOH |
5.275 |
O |
O |
|||||||||
2gw5 | 1 | Q8N423 | 80.3 | 5e-106 |
X-RAY |
2006-06-20 | GLN | A:106 | A:107 | 81.0 | 0.45 | E | -120.7 | 114.7 | 81.0 | 0.45 | 0.0 |
HOH |
4.874 |
C |
O |
||
6bcs | 1 | A0A0G2JNQ7 | 80.3 | 6e-106 |
X-RAY |
2018-09-05 | GLN | A:107 | A:107 | 64.0 | 0.356 | E | -134.1 | 128.7 | 64.0 | 0.356 | 0.0 |
HOH |
5.012 |
NE2 |
O |
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2dyp | 4 | Q8N423 | 80.2 | 2e-105 |
X-RAY |
2006-11-07 | GLN | D:106 | D:106 | 81.0 | 0.45 | E | -127.1 | 126.4 | 81.0 | 0.45 | 0.0 |
AlphaFold DB
Entity | Residue | Monomer | View | ||||||||||
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ID | Entity | Uniprot | Identity | Evalue | Name | Label | Auth | ASA | rASA | SS | φ | ψ | |
af-q8n6c8-f1 | 1 | Q8N6C8 | 100.0 | 0.0 | LEU | A:130 | A:130 | 69.0 | 0.406 | E | -115.7 | 133.8 | |
af-o75019-f1 | 1 | O75019 | 85.39 | 0.0 | LEU | A:130 | A:130 | 60.0 | 0.353 | E | -121.4 | 134.2 | |
af-q8nhl6-f1 | 1 | Q8NHL6 | 86.4 | 0.0 | GLN | A:130 | A:130 | 83.0 | 0.461 | E | -112.3 | 130.1 | |
af-q8n149-f1 | 1 | Q8N149 | 81.84 | 0.0 | LEU | A:128 | A:128 | 36.0 | 0.212 | E | -118.9 | 133.5 | |
af-q8n423-f1 | 1 | Q8N423 | 81.12 | 0.0 | GLN | A:129 | A:129 | 67.0 | 0.372 | E | -118.2 | 129.6 |