Variant
Genome | Chromosome | Position | VCF ID | Ref | Alt | mRNA Change | mRNA Info | GRCh37 | chr19 | 55086447 | . | A | C | CCDS12900.1:NM_006866.2:c.602aAc>aCc_NP_006857.1:p.201N>T | Homo sapiens leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 2 (LILRA2), transcript variant 1, mRNA. |
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PDB
Entity | Residue | Monomer | BioUnit | Ligand | View | ||||||||||||||||||
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PDB | Entity | Uniprot | Identity | Evalue | ExpMethod | Date | Name | Label | Auth | ASA | rASA | SS | φ | ψ | ASA | rASA | ΔASA | Interaction | Name | Distance | Atom(p) | Atom(l) | |
6aee | 4 | A0A0G2JQ44 | 80.41 | 0.0 |
X-RAY |
2019-07-31 | ASN | G:179 | G:180 | 149.0 | 0.931 | T | -70.9 | -13.0 | 118.0 | 0.738 | 0.193 |
B:P61769:0.175 A:P17693:0.019 |
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ASN | H:179 | H:180 | 144.0 | 0.9 | T | -79.0 | -27.0 | NA | NA | NA | |||||||||||||
2otp | 1 | Q8N149 | 99.49 | 6e-142 |
X-RAY |
2008-02-19 | ASN | A:178 | A:178 | 151.0 | 0.944 | T | -57.0 | -32.8 | 151.0 | 0.944 | 0.0 |
HOH |
2.771 |
OD1 |
O |
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ASN | B:178 | B:178 | 146.0 | 0.912 | S | -70.0 | -35.9 | 146.0 | 0.912 | 0.0 |
HOH |
2.781 |
CB |
O |
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3d2u | 3 | Q8NHL6 | 80.81 | 2e-104 |
X-RAY |
2008-07-08 | ASN | C:180 | D:180 | 144.0 | 0.9 | T | -84.7 | -18.8 | 135.0 | 0.844 | 0.056 |
B:P61769:0.056 |
HOH |
2.986 |
OD1 |
O |
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ASN | F:180 | H:180 | 137.0 | 0.856 | T | -79.7 | -17.9 | NA | NA | NA | |||||||||||||
6k60 | 4 | A0A0G2JQ44 | 81.12 | 3e-104 |
X-RAY |
2019-11-27 | ASN | D:181 | D:180 | 130.0 | 0.812 | T | -74.9 | -9.3 | 122.0 | 0.762 | 0.05 |
B:P61769:0.05 |
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ASN | H:181 | H:180 | 139.0 | 0.869 | T | -76.1 | -27.7 | NA | NA | NA | |||||||||||||
1ugn | 1 | Q8NHL6 | 80.3 | 8e-104 |
X-RAY |
2004-08-10 | ASN | A:180 | A:180 | 147.0 | 0.919 | T | -75.7 | -15.1 | 147.0 | 0.919 | 0.0 |
HOH |
3.610 |
CB |
O |
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1g0x | 1 | Q8NHL6 | 80.71 | 1e-103 |
X-RAY |
2001-01-17 | ASN | A:179 | A:180 | 137.0 | 0.856 | T | -74.3 | -18.0 | 137.0 | 0.856 | 0.0 |
HOH |
3.283 |
CB |
O |
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1p7q | 4 | Q8NHL6 | 80.71 | 1e-103 |
X-RAY |
2003-10-14 | ASN | D:179 | D:180 | 135.0 | 0.844 | T | -85.1 | 34.5 | 134.0 | 0.838 | 0.006 |
B:P61769:0.006 |
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1ufu | 1 | Q8NHL6 | 80.71 | 1e-103 |
X-RAY |
2004-08-10 | ASN | A:179 | A:180 | 143.0 | 0.894 | T | -85.1 | 4.2 | 143.0 | 0.894 | 0.0 | ||||||
1vdg | 1 | Q8NHL6 | 80.1 | 3e-102 |
X-RAY |
2005-08-02 | ASN | A:180 | A:180 | 147.0 | 0.919 | T | -59.9 | -26.4 | 147.0 | 0.919 | 0.0 |
HOH |
5.048 |
O |
O |
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ASN | B:180 | B:180 | 144.0 | 0.9 | T | -85.2 | 10.7 | 144.0 | 0.9 | 0.0 |
HOH |
6.423 |
ND2 |
O |
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4no0 | 4 | Q8NHL6 | 80.51 | 5e-102 |
X-RAY |
2014-11-19 | ASN | D:177 | D:180 | 141.0 | 0.881 | T | -72.7 | -18.6 | 140.0 | 0.875 | 0.006 |
B:P61769:0.006 |
HOH |
5.552 |
O |
O |
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6ewa | 4 | D9IDM8 | 80.51 | 5e-102 |
X-RAY |
2018-11-07 | ASN | D:177 | D:180 | 142.0 | 0.887 | T | -71.9 | -28.1 | 131.0 | 0.819 | 0.068 |
B:P61769:0.069 |
HOH |
6.218 |
C |
O |
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ASN | H:177 | H:180 | 138.0 | 0.863 | T | -72.9 | -17.1 | NA | NA | NA | |||||||||||||
6ewc | 4 | A0A0G2JQ44 | 80.51 | 5e-102 |
X-RAY |
2018-11-07 | ASN | D:177 | D:180 | 138.0 | 0.863 | T | -85.2 | 0.6 | 138.0 | 0.863 | 0.0 | ||||||
ASN | H:177 | H:180 | 140.0 | 0.875 | T | -87.7 | 3.4 | NA | NA | NA | |||||||||||||
6ewo | 4 | D9IDM8 | 80.51 | 5e-102 |
X-RAY |
2018-11-07 | ASN | D:177 | D:180 | 138.0 | 0.863 | T | -69.5 | -14.9 | 138.0 | 0.863 | 0.0 |
HOH |
5.181 |
O |
O |
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ASN | H:177 | H:180 | 139.0 | 0.869 | T | -71.7 | -15.6 | NA | NA | NA |
AlphaFold DB
Entity | Residue | Monomer | View | ||||||||||
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ID | Entity | Uniprot | Identity | Evalue | Name | Label | Auth | ASA | rASA | SS | φ | ψ | |
af-q8n149-f1 | 1 | Q8N149 | 100.0 | 0.0 | ASN | A:201 | A:201 | 137.0 | 0.856 | T | -75.3 | -17.9 | |
af-q8n6c8-f1 | 1 | Q8N6C8 | 81.84 | 0.0 | ARG | A:203 | A:203 | 198.0 | 0.88 | T | -73.7 | -20.9 | |
af-q8nhl6-f1 | 1 | Q8NHL6 | 81.15 | 0.0 | ASN | A:203 | A:203 | 110.0 | 0.688 | T | -69.6 | -25.2 |