Variant
Genome | Chromosome | Position | VCF ID | Ref | Alt | mRNA Change | mRNA Info | GRCh37 | chr19 | 55106651 | . | G | A | CCDS12901.1:NM_006863.3:c.445Gtg>Atg_NP_006854.1:p.149V>M | Homo sapiens leukocyte immunoglobulin like receptor A1 (LILRA1), transcript variant 1, mRNA. |
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PDB
Entity | Residue | Monomer | BioUnit | Ligand | View | ||||||||||||||||||
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PDB | Entity | Uniprot | Identity | Evalue | ExpMethod | Date | Name | Label | Auth | ASA | rASA | SS | φ | ψ | ASA | rASA | ΔASA | Interaction | Name | Distance | Atom(p) | Atom(l) | |
6aee | 4 | A0A0G2JQ44 | 85.46 | 0.0 |
X-RAY |
2019-07-31 | VAL | G:125 | G:126 | 65.0 | 0.419 | S | -101.0 | 133.0 | 0.0 | 0.0 | 0.419 |
B:P61769:0.419 |
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VAL | H:125 | H:126 | 66.0 | 0.426 | S | -104.9 | 133.0 | NA | NA | NA | |||||||||||||
6zdx | 2 | A0A0G2JQ46 | 84.21 | 0.0 |
X-RAY |
2020-07-22 | VAL | B:157 | B:126 | 85.0 | 0.548 | S | -78.9 | 154.3 | 2.0 | 0.013 | 0.535 |
A:Q8I4N9:0.535 |
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6aed | 1 | Q8N423 | 84.63 | 0.0 |
X-RAY |
2019-07-31 | VAL | A:125 | A:126 | 58.0 | NA | E | -69.0 | 159.1 | 58.0 | NA | NA | ||||||
1ugn | 1 | Q8NHL6 | 88.89 | 7e-122 |
X-RAY |
2004-08-10 | VAL | A:126 | A:126 | 72.0 | 0.465 | S | -133.2 | 167.7 | 72.0 | 0.465 | 0.0 |
HOH |
3.859 |
CG2 |
O |
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3d2u | 3 | Q8NHL6 | 88.38 | 3e-121 |
X-RAY |
2008-07-08 | VAL | C:126 | D:126 | 51.0 | 0.329 | S | -111.3 | 129.3 | 0.0 | 0.0 | 0.329 |
B:P61769:0.329 |
HOH |
3.995 |
CG1 |
O |
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VAL | F:126 | H:126 | 53.0 | 0.342 | S | -108.5 | 132.7 | NA | NA | NA | |||||||||||||
1g0x | 1 | Q8NHL6 | 88.78 | 1e-120 |
X-RAY |
2001-01-17 | VAL | A:125 | A:126 | 70.0 | 0.452 | S | -125.0 | 141.7 | 70.0 | 0.452 | 0.0 |
HOH |
3.420 |
CG1 |
O |
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1p7q | 4 | Q8NHL6 | 88.78 | 1e-120 |
X-RAY |
2003-10-14 | VAL | D:125 | D:126 | 49.0 | 0.316 | S | -86.5 | 149.3 | 2.0 | 0.013 | 0.303 |
B:P61769:0.303 |
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1ufu | 1 | Q8NHL6 | 88.78 | 1e-120 |
X-RAY |
2004-08-10 | VAL | A:125 | A:126 | 86.0 | 0.555 | S | -112.1 | 179.8 | 86.0 | 0.555 | 0.0 | ||||||
6k60 | 4 | A0A0G2JQ44 | 88.32 | 1e-120 |
X-RAY |
2019-11-27 | VAL | D:127 | D:126 | 49.0 | 0.316 | S | -71.9 | 146.5 | 1.0 | 0.006 | 0.31 |
B:P61769:0.31 |
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VAL | H:127 | H:126 | 57.0 | 0.368 | S | -101.7 | 139.4 | NA | NA | NA | |||||||||||||
4no0 | 4 | Q8NHL6 | 88.72 | 4e-120 |
X-RAY |
2014-11-19 | VAL | D:123 | D:126 | 45.0 | 0.29 | S | -108.5 | 126.6 | 1.0 | 0.006 | 0.284 |
B:P61769:0.284 |
HOH |
3.886 |
CG1 |
O |
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6ewa | 4 | D9IDM8 | 88.72 | 4e-120 |
X-RAY |
2018-11-07 | VAL | D:123 | D:126 | 49.0 | 0.316 | S | -100.6 | 139.0 | 0.0 | 0.0 | 0.316 |
B:P61769:0.316 |
HOH |
3.688 |
CG1 |
O |
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VAL | H:123 | H:126 | 49.0 | 0.316 | S | -97.0 | 134.7 | NA | NA | NA | |||||||||||||
6ewc | 4 | A0A0G2JQ44 | 88.72 | 4e-120 |
X-RAY |
2018-11-07 | VAL | D:123 | D:126 | 49.0 | 0.316 | S | -92.1 | 131.8 | 0.0 | 0.0 | 0.316 |
B:P61769:0.316 |
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VAL | H:123 | H:126 | 50.0 | 0.323 | S | -92.7 | 133.0 | NA | NA | NA | |||||||||||||
6ewo | 4 | D9IDM8 | 88.72 | 4e-120 |
X-RAY |
2018-11-07 | VAL | D:123 | D:126 | 47.0 | 0.303 | S | -96.4 | 135.8 | 0.0 | 0.0 | 0.303 |
B:P61769:0.303 |
HOH |
3.789 |
CG1 |
O |
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VAL | H:123 | H:126 | 51.0 | 0.329 | S | -99.5 | 132.8 | NA | NA | NA | |||||||||||||
5knm | 3 | Q8NHL6 | 86.87 | 3e-118 |
X-RAY |
2017-06-14 | VAL | C:195 | D:126 | 42.0 | 0.271 | S | -73.7 | 162.3 | 0.0 | 0.0 | 0.271 |
B:P61769:0.271 |
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1vdg | 1 | Q8NHL6 | 86.8 | 2e-117 |
X-RAY |
2005-08-02 | VAL | A:126 | A:126 | 79.0 | 0.51 | S | -136.5 | 138.3 | 79.0 | 0.51 | 0.0 |
HOH |
3.846 |
CA |
O |
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VAL | B:126 | B:126 | 65.0 | 0.419 | S | -139.2 | 141.7 | 65.0 | 0.419 | 0.0 |
HOH |
4.929 |
CG2 |
O |
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2gw5 | 1 | Q8N423 | 80.81 | 2e-105 |
X-RAY |
2006-06-20 | VAL | A:125 | A:126 | 57.0 | NA | E | -110.7 | 138.7 | 57.0 | NA | NA |
HOH |
4.517 |
C |
O |
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6bcs | 1 | A0A0G2JNQ7 | 80.81 | 2e-105 |
X-RAY |
2018-09-05 | VAL | A:126 | A:126 | 114.0 | 0.735 | E | -112.4 | 145.4 | 114.0 | 0.735 | 0.0 |
BEN HOH |
3.538 2.793 |
CB N |
C5 O |
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2dyp | 4 | Q8N423 | 81.12 | 3e-105 |
X-RAY |
2006-11-07 | VAL | D:125 | D:125 | 56.0 | 0.361 | S | -93.7 | 140.3 | 4.0 | 0.026 | 0.335 |
B:P61769:0.335 |
HOH |
4.567 |
CG1 |
O |
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2otp | 1 | Q8N149 | 80.3 | 1e-104 |
X-RAY |
2008-02-19 | VAL | A:124 | A:124 | 77.0 | 0.497 | S | -111.5 | 159.8 | 63.0 | 0.406 | 0.091 |
B:Q8N149:0.09 |
HOH |
9.409 |
O |
O |
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VAL | B:124 | B:124 | 73.0 | 0.471 | S | -91.9 | 137.7 | 72.0 | 0.465 | 0.006 |
A:Q8N149:0.006 |
HOH |
4.743 |
N |
O |
AlphaFold DB
Entity | Residue | Monomer | View | ||||||||||
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ID | Entity | Uniprot | Identity | Evalue | Name | Label | Auth | ASA | rASA | SS | φ | ψ | |
af-o75019-f1 | 1 | O75019 | 100.0 | 0.0 | VAL | A:149 | A:149 | 79.0 | 0.51 | E | -101.3 | 142.7 | |
af-q8n6c8-f1 | 1 | Q8N6C8 | 85.39 | 0.0 | VAL | A:149 | A:149 | 68.0 | 0.439 | E | -92.6 | 132.3 | |
af-q8n423-f1 | 1 | Q8N423 | 84.62 | 0.0 | VAL | A:148 | A:148 | 67.0 | 0.432 | E | -85.3 | 130.4 | |
af-q8nhl6-f1 | 1 | Q8NHL6 | 84.73 | 0.0 | VAL | A:149 | A:149 | 75.0 | 0.484 | S | -100.3 | 138.9 |