Variant
Genome | Chromosome | Position | VCF ID | Ref | Alt | mRNA Change | mRNA Info | GRCh37 | chr19 | 55143083 | . | T | A | CCDS42614.1:NM_001081637.1:c.203cTc>cAc_NP_001075106.1:p.68L>H | Homo sapiens leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 1 (LILRB1), transcript variant 1, mRNA. |
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PDB
Entity | Residue | Monomer | BioUnit | Ligand | View | ||||||||||||||||||
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PDB | Entity | Uniprot | Identity | Evalue | ExpMethod | Date | Name | Label | Auth | ASA | rASA | SS | φ | ψ | ASA | rASA | ΔASA | Interaction | Name | Distance | Atom(p) | Atom(l) | |
6zdx | 2 | A0A0G2JQ46 | 99.75 | 0.0 |
X-RAY |
2020-07-22 | LEU | B:76 | B:45 | 114.0 | 0.671 | G | -65.5 | -35.4 | 114.0 | 0.671 | 0.0 | ||||||
6aee | 4 | A0A0G2JQ44 | 99.24 | 0.0 |
X-RAY |
2019-07-31 | PRO | G:44 | G:45 | 86.0 | 0.593 | T | -67.0 | -17.1 | 86.0 | 0.593 | 0.0 | ||||||
PRO | H:44 | H:45 | 79.0 | 0.545 | G | -67.0 | -14.9 | NA | NA | NA | |||||||||||||
5knm | 3 | Q8NHL6 | 100.0 | 1e-142 |
X-RAY |
2017-06-14 | LEU | C:114 | D:45 | 118.0 | 0.694 | S | -80.1 | -36.4 | 103.0 | 0.606 | 0.088 |
B:P61769:0.088 |
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1vdg | 1 | Q8NHL6 | 100.0 | 5e-142 |
X-RAY |
2005-08-02 | LEU | A:45 | A:45 | 105.0 | 0.618 | T | -76.2 | -24.3 | 105.0 | 0.618 | 0.0 |
HOH |
2.853 |
N |
O |
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LEU | B:45 | B:45 | 103.0 | 0.606 | G | -57.3 | -44.2 | 103.0 | 0.606 | 0.0 |
HOH |
3.767 |
N |
O |
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3d2u | 3 | Q8NHL6 | 98.48 | 9e-140 |
X-RAY |
2008-07-08 | PRO | C:45 | D:45 | 71.0 | 0.49 | H | -57.4 | -34.2 | 47.0 | 0.324 | 0.166 |
A:Q4A1U8:0.166 |
HOH |
3.698 |
CG |
O |
|
PRO | F:45 | H:45 | 74.0 | 0.51 | G | -50.3 | -38.4 | NA | NA | NA | |||||||||||||
6k60 | 4 | A0A0G2JQ44 | 98.48 | 4e-139 |
X-RAY |
2019-11-27 | PRO | D:46 | D:45 | 69.0 | 0.476 | G | -73.2 | -6.6 | 69.0 | 0.476 | 0.0 | ||||||
PRO | H:46 | H:45 | 73.0 | 0.503 | H | -69.4 | -15.2 | NA | NA | NA | |||||||||||||
1ugn | 1 | Q8NHL6 | 97.98 | 4e-139 |
X-RAY |
2004-08-10 | PRO | A:45 | A:45 | 75.0 | 0.517 | H | -54.3 | -29.2 | 75.0 | 0.517 | 0.0 |
HOH |
3.325 |
CD |
O |
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1g0x | 1 | Q8NHL6 | 98.48 | 6e-139 |
X-RAY |
2001-01-17 | PRO | A:44 | A:45 | 75.0 | 0.517 | H | -55.9 | -28.4 | 75.0 | 0.517 | 0.0 |
HOH |
2.834 |
CB |
O |
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1p7q | 4 | Q8NHL6 | 98.48 | 6e-139 |
X-RAY |
2003-10-14 | PRO | D:44 | D:45 | 58.0 | 0.4 | H | -56.0 | -28.4 | 46.0 | 0.317 | 0.083 |
B:P61769:0.083 |
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1ufu | 1 | Q8NHL6 | 98.48 | 6e-139 |
X-RAY |
2004-08-10 | PRO | A:44 | A:45 | 76.0 | 0.524 | G | -52.6 | -37.1 | 76.0 | 0.524 | 0.0 | ||||||
4no0 | 4 | Q8NHL6 | 98.46 | 6e-137 |
X-RAY |
2014-11-19 | PRO | D:42 | D:45 | 74.0 | 0.51 | T | -62.4 | -28.1 | 74.0 | 0.51 | 0.0 |
EDO HOH |
7.650 5.929 |
CD N |
C2 O |
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6ewa | 4 | D9IDM8 | 98.46 | 6e-137 |
X-RAY |
2018-11-07 | PRO | D:42 | D:45 | 71.0 | 0.49 | T | -59.3 | -22.7 | 67.0 | 0.462 | 0.028 |
B:P61769:0.028 |
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PRO | H:42 | H:45 | 72.0 | 0.497 | G | -60.9 | -26.1 | NA | NA | NA | |||||||||||||
6ewc | 4 | A0A0G2JQ44 | 98.46 | 6e-137 |
X-RAY |
2018-11-07 | PRO | D:42 | D:45 | 73.0 | 0.503 | G | -50.2 | -39.4 | 64.0 | 0.441 | 0.062 |
B:P61769:0.062 |
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PRO | H:42 | H:45 | 73.0 | 0.503 | G | -50.6 | -40.4 | NA | NA | NA | |||||||||||||
6ewo | 4 | D9IDM8 | 98.46 | 6e-137 |
X-RAY |
2018-11-07 | PRO | D:42 | D:45 | 68.0 | 0.469 | G | -54.4 | -32.4 | 59.0 | 0.407 | 0.062 |
B:P61769:0.062 |
HOH |
7.011 |
CG |
O |
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PRO | H:42 | H:45 | 64.0 | 0.441 | G | -56.2 | -25.7 | NA | NA | NA | |||||||||||||
2gw5 | 1 | Q8N423 | 80.3 | 7e-103 |
X-RAY |
2006-06-20 | SER | A:45 | NA:NA | DO | NA | DO | DO | DO | NA | NA | NA | ||||||
6bcs | 1 | A0A0G2JNQ7 | 80.3 | 7e-103 |
X-RAY |
2018-09-05 | SER | A:46 | A:45 | 131.0 | 1.0 | S | -77.2 | -18.9 | 131.0 | 1.0 | 0.0 |
BEN DMS HOH |
7.898 9.758 4.198 |
O O O |
N2 C2 O |
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2otp | 1 | Q8N149 | 80.3 | 8e-103 |
X-RAY |
2008-02-19 | SER | A:45 | A:45 | 50.0 | 0.435 | -159.9 | 155.0 | 50.0 | 0.435 | 0.0 |
HOH |
6.341 |
N |
O |
|||
SER | B:45 | B:45 | 50.0 | 0.435 | -99.8 | 155.5 | 50.0 | 0.435 | 0.0 |
HOH |
6.954 |
N |
O |
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2dyp | 4 | Q8N423 | 80.61 | 1e-102 |
X-RAY |
2006-11-07 | SER | D:45 | D:45 | 68.0 | 0.591 | -32.1 | -60.4 | 65.0 | 0.565 | 0.026 |
B:P61769:0.009 A:P17693:0.026 |
HOH |
3.694 |
CB |
O |
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3q2c | 1 | Q8N6C8 | 89.69 | 4e-52 |
X-RAY |
2011-07-13 | LEU | A:45 | A:45 | 107.0 | 0.629 | G | -55.0 | -31.8 | 107.0 | 0.629 | 0.0 |
HOH |
5.758 |
O |
O |
AlphaFold DB
Entity | Residue | Monomer | View | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|
ID | Entity | Uniprot | Identity | Evalue | Name | Label | Auth | ASA | rASA | SS | φ | ψ | |
af-q8nhl6-f1 | 1 | Q8NHL6 | 100.0 | 0.0 | LEU | A:68 | A:68 | 123.0 | 0.724 | G | -61.6 | -24.2 | |
af-q8n6c8-f1 | 1 | Q8N6C8 | 84.02 | 0.0 | LEU | A:68 | A:68 | 115.0 | 0.676 | T | -62.3 | -17.2 | |
af-o75019-f1 | 1 | O75019 | 80.48 | 0.0 | PRO | A:68 | A:68 | 79.0 | 0.545 | T | -64.9 | -10.1 |