Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr19 55253516 . G A CCDS33107.1:NM_015868.2:c.161aGg>aAg_NP_056952.2:p.54R>K Homo sapiens killer cell immunoglobulin like receptor, two Ig domains and long cytoplasmic tail 3 (KIR2DL3), mRNA.
pdb_id: 
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label_comp_id: 
auth_asym_id: 
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alphafold_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
1b6u 1 P43628 96.55 6e-167 X-RAY
 1999-01-27 ARG A:33 A:33 170.0 0.756 -95.7 36.7 170.0 0.756 0.0
1im9 4 P43626 92.86 1e-153 X-RAY
 2001-05-30 MET D:34 D:33 77.0 0.416 -77.1 102.2 77.0 0.416 0.0
6pag 4 P43628 100.0 8e-151 X-RAY
 2020-12-16 ARG D:33 D:33 183.0 0.813 -98.6 60.4 183.0 0.813 0.0
4n8v 1 P43631 99.0 5e-147 X-RAY
 2014-02-05 ARG A:34 G:33 164.0 0.729 -62.9 138.6 164.0 0.729 0.0
ARG B:34 I:33 185.0 0.822 -63.4 141.1 NA NA NA
6pa1 4 P43627 98.04 8e-147 X-RAY
 2020-12-16 ARG D:33 D:33 110.0 0.489 64.5 50.5 110.0 0.489 0.0
ARG H:33 H:33 170.0 0.756 65.1 70.5 NA NA NA
1m4k 1 P43631 99.0 1e-146 X-RAY
 2003-04-15 ARG A:33 A:33 168.0 0.747 -71.0 90.9 168.0 0.747 0.0 HOH
 9.648
 O
 O
7duu 4 P43631 99.0 1e-146 X-RAY
 2022-02-02 ARG D:33 D:33 169.0 0.751 -77.1 64.3 169.0 0.751 0.0 HOH
 2.712
 NH1
 O
1efx 4 P43627 98.49 9e-144 X-RAY
 2000-06-14 ARG D:33 D:33 173.0 0.769 -76.8 59.0 173.0 0.769 0.0 HOH
 7.200
 O
 O
ARG E:33 E:33 150.0 0.667 -78.1 61.0 150.0 0.667 0.0 HOH
 8.021
 O
 O
2dli 1 P43627 98.47 3e-141 X-RAY
 2000-01-13 ARG A:30 A:33 183.0 0.813 -45.6 67.2 183.0 0.813 0.0
2dl2 1 P43627 97.96 1e-140 X-RAY
 1999-03-30 ARG A:30 A:33 176.0 0.782 -50.2 135.2 176.0 0.782 0.0
1nkr 1 P43626 92.5 4e-135 X-RAY
 1998-11-11 MET A:34 A:33 77.0 0.416 -77.1 75.2 77.0 0.416 0.0 HOH
 7.260
 O
 O
3h8n 1 P43632 89.23 3e-125 X-RAY
 2009-10-20 MET A:28 A:33 67.0 0.362 -97.3 125.4 67.0 0.362 0.0
5t6z 4 P43629 84.16 1e-118 X-RAY
 2017-03-01 MET D:128 G:128 79.0 0.427 -78.1 102.0 79.0 0.427 0.0 HOH
 2.771
 N
 O
5t70 3 P43629 84.16 1e-118 X-RAY
 2017-03-01 MET C:128 G:128 88.0 0.476 -85.8 94.2 88.0 0.476 0.0 HOH
 2.760
 N
 O
6v3j 4 P43629 84.16 1e-118 X-RAY
 2020-05-20 MET D:128 G:128 141.0 0.762 -84.0 78.8 141.0 0.762 0.0 HOH
 2.924
 O
 O
7k80 4 P43629 84.16 1e-118 X-RAY
 2020-12-09 MET G:128 G:128 85.0 0.459 -90.8 93.6 85.0 0.459 0.0 HOH
 8.183
 O
 O
MET H:128 H:128 146.0 0.789 -85.3 90.4 NA NA NA
5b39 4 P43629 84.16 1e-118 X-RAY
 2016-03-30 MET D:128 G:128 81.0 0.438 -74.9 81.3 81.0 0.438 0.0 HOH
 8.838
 O
 O
3vh8 4 P43629 84.16 2e-118 X-RAY
 2011-10-26 MET D:145 G:128 79.0 0.427 -77.6 101.9 79.0 0.427 0.0 HOH
 2.838
 N
 O
MET H:145 H:128 81.0 0.438 -77.6 104.8 NA NA NA
5b38 4 P43629 83.17 9e-116 X-RAY
 2016-03-30 MET D:128 G:128 106.0 0.573 -76.2 79.2 106.0 0.573 0.0 HOH
 7.953
 N
 O
3wuw 4 P43629 83.59 2e-113 X-RAY
 2014-05-28 MET D:137 G:128 82.0 0.443 -77.8 101.4 82.0 0.443 0.0 HOH
 3.381
 O
 O
7k81 4 I6LEL9 82.74 5e-112 X-RAY
 2020-12-09 MET D:123 G:128 88.0 0.476 -80.0 68.3 88.0 0.476 0.0 HOH
 7.889
 N
 O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p43628-f1 1 P43628 100.0 0.0 ARG A:54 A:54 179.0 0.796 -73.8 67.3
af-a0a0g2jnf4-f1 1 A0A0G2JNF4 97.35 0.0 ARG A:54 A:54 181.0 0.804 -72.5 75.1
af-p43627-f1 1 P43627 95.0 0.0 ARG A:54 A:54 192.0 0.853 -72.8 70.4
af-p43626-f1 1 P43626 91.76 0.0 MET A:54 A:54 80.0 0.432 -74.4 73.9
af-a0a191urj7-f1 1 A0A191URJ7 90.62 0.0 MET A:54 A:54 77.0 0.416 -75.6 75.3
af-p43631-f1 1 P43631 95.72 0.0 ARG A:54 A:54 133.0 0.591 -79.3 71.8
af-a0a5k1vdz0-f1 1 A0A5K1VDZ0 86.18 0.0 MET A:54 A:54 73.0 0.395 -73.5 77.2
af-q14954-f1 1 Q14954 90.79 0.0 MET A:54 A:54 83.0 0.449 -77.8 75.3
af-a0a0g2jlq3-f1 1 A0A0G2JLQ3 89.8 0.0 MET A:54 A:54 81.0 0.438 -78.3 75.2
af-q14953-f1 1 Q14953 89.8 0.0 MET A:54 A:54 80.0 0.432 -77.7 75.6
af-a0a0g2jq47-f1 1 A0A0G2JQ47 90.91 0.0 MET A:47 A:47 82.0 0.443 -75.1 72.4
af-a0a0g2jng1-f1 1 A0A0G2JNG1 89.47 0.0 MET A:54 A:54 80.0 0.432 -78.7 74.8
af-q14952-f1 1 Q14952 89.14 0.0 MET A:54 A:54 75.0 0.405 -79.2 75.4
af-p43632-f1 1 P43632 88.16 0.0 MET A:54 A:54 72.0 0.389 -73.2 72.7
af-a0a1w2pqm1-f1 1 A0A1W2PQM1 85.53 0.0 MET A:54 A:54 77.0 0.416 -77.5 74.3
af-p43629-f1 1 P43629 85.53 0.0 MET A:149 A:149 77.0 0.416 -79.1 74.5
af-p43630-f1 1 P43630 84.91 0.0 MET A:149 A:149 72.0 0.389 -77.6 80.4
af-a0a0g2jlm5-f1 1 A0A0G2JLM5 90.04 0.0 MET A:148 A:148 81.0 0.438 -76.6 80.1
af-q14943-f1 1 Q14943 82.54 9e-149 MET A:149 A:149 79.0 0.427 -74.5 75.5
af-a0a376a8z9-f1 1 A0A376A8Z9 90.95 1e-147 MET A:54 A:54 83.0 0.449 -75.6 75.8
af-a0a2r8ycy7-f1 1 A0A2R8YCY7 98.49 8e-144 ARG A:31 A:31 175.0 0.778 -77.2 77.1
af-a0a5f9z9y6-f1 1 A0A5F9Z9Y6 97.99 5e-143 ARG A:31 A:31 195.0 0.867 -72.0 70.2
af-a0a1w2pqf6-f1 1 A0A1W2PQF6 97.99 2e-142 ARG A:31 A:31 128.0 0.569 -78.6 73.4
af-a0a5f9zh88-f1 1 A0A5F9ZH88 94.97 9e-139 MET A:31 A:31 84.0 0.454 -76.8 73.8
af-a0a1w2prs3-f1 1 A0A1W2PRS3 88.94 2e-125 MET A:31 A:31 110.0 0.595 -70.7 103.1
af-a0a0g2jmm0-f1 1 A0A0G2JMM0 89.39 2e-123 MET A:149 A:149 82.0 0.443 -76.3 68.7
af-a0a0g2jn01-f1 1 A0A0G2JN01 88.89 6e-123 MET A:149 A:149 82.0 0.443 -72.6 66.0