Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr19 55253593 . G A CCDS33107.1:NM_015868.2:c.238Gtc>Atc_NP_056952.2:p.80V>I Homo sapiens killer cell immunoglobulin like receptor, two Ig domains and long cytoplasmic tail 3 (KIR2DL3), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
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label_comp_id: 
auth_asym_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
1b6u 1 P43628 96.55 6e-167 X-RAY
 1999-01-27 VAL A:59 A:59 46.0 0.297 -155.9 129.1 33.0 0.213 0.084 A:P43628:0.084
1im9 4 P43626 92.86 1e-153 X-RAY
 2001-05-30 VAL D:60 D:59 30.0 0.194 -140.3 120.8 30.0 0.194 0.0 HOH
 9.143
 CG1
 O
6pag 4 P43628 100.0 8e-151 X-RAY
 2020-12-16 VAL D:59 D:59 38.0 0.245 E -124.3 136.8 38.0 0.245 0.0
4n8v 1 P43631 99.0 5e-147 X-RAY
 2014-02-05 VAL A:60 NA:NA DO NA DO DO DO NA NA NA
VAL B:60 NA:NA DO NA DO DO DO NA NA NA
6pa1 4 P43627 98.04 8e-147 X-RAY
 2020-12-16 VAL D:59 D:59 70.0 0.452 360.0 152.4 70.0 0.452 0.0
VAL H:59 H:59 114.0 0.735 360.0 152.9 NA NA NA
1m4k 1 P43631 99.0 1e-146 X-RAY
 2003-04-15 VAL A:59 A:59 42.0 0.271 -126.9 148.6 42.0 0.271 0.0 HOH
 9.043
 CG1
 O
7duu 4 P43631 99.0 1e-146 X-RAY
 2022-02-02 VAL D:59 D:59 41.0 0.265 -139.0 144.2 41.0 0.265 0.0 HOH
 7.592
 CG1
 O
1efx 4 P43627 98.49 9e-144 X-RAY
 2000-06-14 VAL D:59 D:59 40.0 0.258 E -141.5 143.0 40.0 0.258 0.0 HOH
 4.957
 CG1
 O
VAL E:59 E:59 30.0 0.194 E -111.4 160.0 30.0 0.194 0.0 HOH
 5.147
 CG1
 O
2dli 1 P43627 98.47 3e-141 X-RAY
 2000-01-13 VAL A:56 A:59 40.0 0.258 S -73.2 142.0 40.0 0.258 0.0
2dl2 1 P43627 97.96 1e-140 X-RAY
 1999-03-30 VAL A:56 A:59 37.0 0.239 S -119.6 -110.3 37.0 0.239 0.0 HOH
 8.693
 CG2
 O
1nkr 1 P43626 92.5 4e-135 X-RAY
 1998-11-11 VAL A:60 A:59 38.0 0.245 E -120.7 145.4 38.0 0.245 0.0 HOH
 7.080
 CG2
 O
3h8n 1 P43632 89.23 3e-125 X-RAY
 2009-10-20 VAL A:54 A:59 51.0 0.329 B -143.5 149.6 51.0 0.329 0.0
5t6z 4 P43629 84.16 1e-118 X-RAY
 2017-03-01 VAL D:154 G:154 38.0 0.245 E -137.8 154.2 38.0 0.245 0.0 NAG
HOH
 8.191
6.327
 CG2
O
 O7
O
5t70 3 P43629 84.16 1e-118 X-RAY
 2017-03-01 VAL C:154 G:154 43.0 0.277 E -126.3 144.1 43.0 0.277 0.0 NAG
HOH
 8.971
4.709
 CG2
N
 O7
O
6v3j 4 P43629 84.16 1e-118 X-RAY
 2020-05-20 VAL D:154 G:154 50.0 0.323 E -114.1 142.6 50.0 0.323 0.0 NAG
HOH
 8.803
5.288
 CG2
N
 O7
O
7k80 4 P43629 84.16 1e-118 X-RAY
 2020-12-09 VAL G:154 G:154 38.0 0.245 E -129.3 141.8 38.0 0.245 0.0 NAG
HOH
 8.762
8.023
 CG2
CG1
 O7
O
VAL H:154 H:154 38.0 0.245 E -116.9 136.7 NA NA NA
5b39 4 P43629 84.16 1e-118 X-RAY
 2016-03-30 VAL D:154 G:154 46.0 0.297 E -129.9 145.7 46.0 0.297 0.0 NAG
 9.899
 CG2
 O4
3vh8 4 P43629 84.16 2e-118 X-RAY
 2011-10-26 VAL D:171 G:154 34.0 0.219 E -137.8 154.4 34.0 0.219 0.0 NAG
HOH
 8.708
4.580
 CG2
CG2
 O7
O
VAL H:171 H:154 36.0 0.232 E -138.6 156.8 NA NA NA
5b38 4 P43629 83.17 9e-116 X-RAY
 2016-03-30 VAL D:154 G:154 41.0 0.265 E -123.7 149.3 41.0 0.265 0.0
3wuw 4 P43629 83.59 2e-113 X-RAY
 2014-05-28 VAL D:163 G:154 36.0 0.232 E -137.6 153.5 36.0 0.232 0.0 NAG
HOH
 7.961
4.086
 CG2
CG2
 O7
O
7k81 4 I6LEL9 82.74 5e-112 X-RAY
 2020-12-09 VAL D:149 G:154 36.0 0.232 E -129.0 144.8 36.0 0.232 0.0 NAG
HOH
 8.503
8.362
 CG2
CB
 O7
O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p43628-f1 1 P43628 100.0 0.0 VAL A:80 A:80 50.0 0.323 E -103.2 135.0
af-a0a0g2jnf4-f1 1 A0A0G2JNF4 97.35 0.0 VAL A:80 A:80 48.0 0.31 E -101.0 137.1
af-p43627-f1 1 P43627 95.0 0.0 VAL A:80 A:80 47.0 0.303 E -108.9 133.9
af-p43626-f1 1 P43626 91.76 0.0 VAL A:80 A:80 47.0 0.303 E -119.1 137.3
af-a0a191urj7-f1 1 A0A191URJ7 90.62 0.0 VAL A:80 A:80 46.0 0.297 E -119.4 136.3
af-p43631-f1 1 P43631 95.72 0.0 VAL A:80 A:80 48.0 0.31 E -104.1 150.6
af-a0a5k1vdz0-f1 1 A0A5K1VDZ0 86.18 0.0 VAL A:80 A:80 49.0 0.316 E -118.8 136.3
af-q14954-f1 1 Q14954 90.79 0.0 VAL A:80 A:80 46.0 0.297 E -122.9 149.2
af-a0a0g2jlq3-f1 1 A0A0G2JLQ3 89.8 0.0 VAL A:80 A:80 46.0 0.297 E -120.7 147.4
af-q14953-f1 1 Q14953 89.8 0.0 VAL A:80 A:80 44.0 0.284 E -124.0 141.6
af-a0a0g2jq47-f1 1 A0A0G2JQ47 90.91 0.0 VAL A:73 A:73 46.0 0.297 E -120.0 138.4
af-a0a0g2jng1-f1 1 A0A0G2JNG1 89.47 0.0 VAL A:80 A:80 46.0 0.297 E -122.1 149.4
af-q14952-f1 1 Q14952 89.14 0.0 VAL A:80 A:80 46.0 0.297 E -122.9 138.8
af-p43632-f1 1 P43632 88.16 0.0 VAL A:80 A:80 45.0 0.29 E -120.1 135.5
af-a0a1w2pqm1-f1 1 A0A1W2PQM1 85.53 0.0 VAL A:80 A:80 54.0 0.348 E -122.6 136.3
af-p43629-f1 1 P43629 85.53 0.0 VAL A:175 A:175 41.0 0.265 E -122.9 136.6
af-p43630-f1 1 P43630 84.91 0.0 VAL A:175 A:175 43.0 0.277 E -120.6 138.2
af-a0a0g2jlm5-f1 1 A0A0G2JLM5 90.04 0.0 VAL A:174 A:174 45.0 0.29 E -119.9 148.3
af-q14943-f1 1 Q14943 82.54 9e-149 VAL A:175 A:175 42.0 0.271 E -123.5 147.7
af-a0a376a8z9-f1 1 A0A376A8Z9 90.95 1e-147 VAL A:80 A:80 44.0 0.284 E -128.4 139.9
af-a0a2r8ycy7-f1 1 A0A2R8YCY7 98.49 8e-144 VAL A:57 A:57 46.0 0.297 E -111.3 141.7
af-a0a5f9z9y6-f1 1 A0A5F9Z9Y6 97.99 5e-143 VAL A:57 A:57 49.0 0.316 E -108.6 134.2
af-a0a1w2pqf6-f1 1 A0A1W2PQF6 97.99 2e-142 VAL A:57 A:57 47.0 0.303 E -102.5 153.3
af-a0a5f9zh88-f1 1 A0A5F9ZH88 94.97 9e-139 VAL A:57 A:57 48.0 0.31 E -123.9 151.4
af-a0a1w2prs3-f1 1 A0A1W2PRS3 88.94 2e-125 VAL A:57 A:57 49.0 0.316 E -103.9 128.5
af-a0a0g2jmm0-f1 1 A0A0G2JMM0 89.39 2e-123 VAL A:175 A:175 45.0 0.29 E -128.4 140.3
af-a0a0g2jn01-f1 1 A0A0G2JN01 88.89 6e-123 VAL A:175 A:175 46.0 0.297 E -126.3 149.5