Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr19 55331228 . G A CCDS42621.1:NM_013289.2:c.416aGa>aAa_NP_037421.2:p.139R>K Homo sapiens killer cell immunoglobulin like receptor, three Ig domains and long cytoplasmic tail 1 (KIR3DL1), transcript variant 1 (reference allele), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
5t6z 4 P43629 100.0 0.0 X-RAY
 2017-03-01 ARG D:118 G:118 135.0 0.6 -120.6 158.8 135.0 0.6 0.0 NAG
HOH
 9.441
2.070
 O
NH1
 O6
O
5t70 3 P43629 100.0 0.0 X-RAY
 2017-03-01 ARG C:118 G:118 142.0 0.631 -121.7 151.4 142.0 0.631 0.0 NAG
HOH
 9.739
2.864
 O
NH2
 O6
O
6v3j 4 P43629 100.0 0.0 X-RAY
 2020-05-20 ARG D:118 G:118 137.0 0.609 -107.3 152.6 137.0 0.609 0.0 NAG
HOH
 9.499
3.021
 O
O
 O6
O
7k80 4 P43629 100.0 0.0 X-RAY
 2020-12-09 ARG G:118 G:118 149.0 0.662 -116.1 162.3 149.0 0.662 0.0 NAG
HOH
 9.759
4.819
 O
O
 O6
O
ARG H:118 H:118 148.0 0.658 -113.0 161.7 NA NA NA
3vh8 4 P43629 99.67 0.0 X-RAY
 2011-10-26 ARG D:135 G:118 137.0 0.609 -120.7 158.8 137.0 0.609 0.0 NAG
HOH
 9.339
2.737
 O
N
 O6
O
ARG H:135 H:118 140.0 0.622 -120.7 160.5 NA NA NA
5b39 4 P43629 99.0 0.0 X-RAY
 2016-03-30 ARG D:118 G:118 135.0 0.6 -117.9 154.5 135.0 0.6 0.0 NAG
HOH
 9.013
4.472
 O
NH2
 O6
O
5b38 4 P43629 99.33 0.0 X-RAY
 2016-03-30 ARG D:118 G:118 138.0 0.613 -116.7 160.1 138.0 0.613 0.0 NAG
HOH
 9.407
2.398
 O
O
 O6
O
3wuw 4 P43629 100.0 0.0 X-RAY
 2014-05-28 ARG D:127 G:118 130.0 0.578 -120.4 159.4 130.0 0.578 0.0 NAG
HOH
 9.853
2.692
 O
O
 O6
O
7k81 4 I6LEL9 99.31 0.0 X-RAY
 2020-12-09 ARG D:113 G:118 137.0 0.609 -110.8 157.6 137.0 0.609 0.0 NAG
HOH
 9.414
2.738
 O
O
 O6
O
1b6u 1 P43628 84.23 8e-133 X-RAY
 1999-01-27 THR A:23 A:23 83.0 0.593 -103.8 134.5 83.0 0.593 0.0
1im9 4 P43626 82.67 1e-131 X-RAY
 2001-05-30 THR D:24 D:23 84.0 0.6 -135.7 169.1 84.0 0.6 0.0 HOH
 4.900
 O
 O
6pag 4 P43628 84.16 5e-119 X-RAY
 2020-12-16 THR D:23 D:23 82.0 0.586 -66.4 133.0 82.0 0.586 0.0
4n8v 1 P43631 83.58 8e-117 X-RAY
 2014-02-05 THR A:24 G:23 79.0 0.564 -114.8 148.8 79.0 0.564 0.0
THR B:24 I:23 78.0 0.557 -114.3 148.9 NA NA NA
1m4k 1 P43631 84.34 1e-116 X-RAY
 2003-04-15 THR A:23 A:23 80.0 0.571 -125.6 152.0 80.0 0.571 0.0 HOH
 3.189
 N
 O
7duu 4 P43631 84.34 1e-116 X-RAY
 2022-02-02 THR D:23 D:23 74.0 0.529 -111.2 150.7 74.0 0.529 0.0 HOH
 2.923
 O
 O
6pa1 4 P43627 83.17 4e-116 X-RAY
 2020-12-16 THR D:23 D:23 92.0 0.657 -109.0 140.1 92.0 0.657 0.0
THR H:23 H:23 91.0 0.65 -108.9 141.2 NA NA NA
1nkr 1 P43626 81.59 3e-114 X-RAY
 1998-11-11 THR A:24 A:23 84.0 0.6 -98.6 156.2 84.0 0.6 0.0 HOH
 2.676
 O
 O
1efx 4 P43627 83.25 4e-113 X-RAY
 2000-06-14 THR D:23 D:23 68.0 0.486 -113.1 156.8 68.0 0.486 0.0 HOH
 3.296
 O
 O
THR E:23 E:23 81.0 0.579 -116.5 162.7 81.0 0.579 0.0 HOH
 2.488
 N
 O
2dl2 1 P43627 83.59 8e-113 X-RAY
 1999-03-30 THR A:20 A:23 96.0 0.686 -62.6 146.8 96.0 0.686 0.0 HOH
 8.569
 OG1
 O
2dli 1 P43627 83.59 1e-112 X-RAY
 2000-01-13 THR A:20 A:23 78.0 0.557 -139.0 150.6 78.0 0.557 0.0
3h8n 1 P43632 81.54 2e-112 X-RAY
 2009-10-20 THR A:18 A:23 85.0 0.607 -119.1 154.0 85.0 0.607 0.0 HOH
 2.772
 O
 O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p43629-f1 1 P43629 100.0 0.0 ARG A:139 A:139 127.0 0.564 -124.4 149.6
af-p43630-f1 1 P43630 85.59 0.0 THR A:139 A:139 72.0 0.514 -123.1 139.6
af-q14943-f1 1 Q14943 95.15 0.0 ARG A:139 A:139 152.0 0.676 -118.0 151.8
af-a0a0g2jnf4-f1 1 A0A0G2JNF4 87.12 0.0 THR A:44 A:44 70.0 0.5 -129.9 138.7
af-p43628-f1 1 P43628 85.53 0.0 THR A:44 A:44 69.0 0.493 -129.7 137.0
af-p43632-f1 1 P43632 82.21 6e-170 THR A:44 A:44 75.0 0.536 -122.6 135.7
af-a0a0g2jq47-f1 1 A0A0G2JQ47 82.56 1e-169 THR A:37 A:37 72.0 0.514 -97.0 138.3
af-q14953-f1 1 Q14953 81.49 9e-166 THR A:44 A:44 84.0 0.6 -118.2 150.7
af-a0a0g2jlq3-f1 1 A0A0G2JLQ3 81.49 4e-165 THR A:44 A:44 88.0 0.629 -122.8 151.1
af-a0a0g2jng1-f1 1 A0A0G2JNG1 80.43 1e-162 THR A:44 A:44 83.0 0.593 -122.4 150.3
af-a0a5f9zh88-f1 1 A0A5F9ZH88 82.41 1e-115 THR A:21 A:21 74.0 0.529 -98.3 136.2
af-a0a2r8ycy7-f1 1 A0A2R8YCY7 83.42 5e-115 THR A:21 A:21 69.0 0.493 -123.8 133.2
af-a0a5f9z9y6-f1 1 A0A5F9Z9Y6 82.91 4e-114 THR A:21 A:21 69.0 0.493 -123.7 139.7
af-a0a376a8z9-f1 1 A0A376A8Z9 82.83 1e-113 THR A:44 A:44 81.0 0.579 -116.3 146.8
af-a0a1w2pqf6-f1 1 A0A1W2PQF6 82.91 3e-113 THR A:21 A:21 70.0 0.5 -122.2 133.4
af-a0a1w2prs3-f1 1 A0A1W2PRS3 81.91 5e-113 THR A:21 A:21 88.0 0.629 -120.8 151.0