Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr19 55331301 . C A CCDS42621.1:NM_013289.2:c.489gaC>gaA_NP_037421.2:p.163D>E Homo sapiens killer cell immunoglobulin like receptor, three Ig domains and long cytoplasmic tail 1 (KIR3DL1), transcript variant 1 (reference allele), mRNA.
pdb_id: 
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label_comp_id: 
auth_asym_id: 
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alphafold_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
5t6z 4 P43629 100.0 0.0 X-RAY
 2017-03-01 ASP D:142 G:142 135.0 0.9 -71.3 136.2 122.0 0.813 0.087 A:P18465:0.087
 HOH
 2.960
 OD2
 O
5t70 3 P43629 100.0 0.0 X-RAY
 2017-03-01 ASP C:142 G:142 147.0 0.98 -91.4 130.6 127.0 0.847 0.133 A:P18465:0.133
 HOH
 2.659
 OD1
 O
6v3j 4 P43629 100.0 0.0 X-RAY
 2020-05-20 ASP D:142 G:142 148.0 0.987 -98.1 123.5 147.0 0.98 0.007 A:I3ZN84:0.007
 NAG
HOH
 8.195
2.384
 OD1
O
 O7
O
7k80 4 P43629 100.0 0.0 X-RAY
 2020-12-09 ASP G:142 G:142 84.0 0.56 -62.0 139.7 84.0 0.56 0.0 NAG
HOH
 6.370
2.154
 OD2
OD2
 C8
O
ASP H:142 H:142 78.0 0.52 -68.1 137.7 NA NA NA
3vh8 4 P43629 99.67 0.0 X-RAY
 2011-10-26 ASP D:159 G:142 85.0 0.567 -67.5 135.9 85.0 0.567 0.0 NAG
HOH
 5.407
2.662
 OD2
OD1
 C8
O
ASP H:159 H:142 84.0 0.56 -61.9 134.4 NA NA NA
5b39 4 P43629 99.0 0.0 X-RAY
 2016-03-30 ASP D:142 G:142 133.0 0.887 -99.3 135.7 133.0 0.887 0.0 NAG
HOH
 7.753
2.348
 OD1
O
 C8
O
5b38 4 P43629 99.33 0.0 X-RAY
 2016-03-30 ASP D:142 G:142 121.0 0.807 -102.5 139.4 121.0 0.807 0.0 NAG
HOH
 7.477
2.305
 OD2
OD2
 C8
O
3wuw 4 P43629 100.0 0.0 X-RAY
 2014-05-28 ASP D:151 G:142 100.0 0.667 -70.2 136.4 100.0 0.667 0.0 NAG
HOH
 8.009
2.087
 OD1
OD2
 C8
O
7k81 4 I6LEL9 99.31 0.0 X-RAY
 2020-12-09 ASP D:137 G:142 97.0 0.647 -63.8 146.5 97.0 0.647 0.0 NAG
HOH
 4.794
2.756
 OD2
OD1
 C8
O
1b6u 1 P43628 84.23 8e-133 X-RAY
 1999-01-27 ASP A:47 A:47 70.0 0.467 E -139.8 164.3 70.0 0.467 0.0
1im9 4 P43626 82.67 1e-131 X-RAY
 2001-05-30 ASP D:48 D:47 74.0 0.493 E -173.3 153.6 74.0 0.493 0.0 HOH
 2.972
 OD2
 O
6pag 4 P43628 84.16 5e-119 X-RAY
 2020-12-16 ASP D:47 D:47 74.0 0.493 E -160.1 163.2 74.0 0.493 0.0
4n8v 1 P43631 83.58 8e-117 X-RAY
 2014-02-05 ASP A:48 G:47 71.0 0.473 E -166.7 148.1 71.0 0.473 0.0
ASP B:48 I:47 70.0 0.467 E -166.8 148.4 NA NA NA
1m4k 1 P43631 84.34 1e-116 X-RAY
 2003-04-15 ASP A:47 A:47 102.0 0.68 E -167.2 173.3 102.0 0.68 0.0 HOH
 4.226
 CB
 O
7duu 4 P43631 84.34 1e-116 X-RAY
 2022-02-02 ASP D:47 D:47 77.0 0.513 E -152.4 163.8 77.0 0.513 0.0 HOH
 8.235
 N
 O
6pa1 4 P43627 83.17 4e-116 X-RAY
 2020-12-16 ASP D:47 D:47 76.0 0.507 E -159.2 167.6 76.0 0.507 0.0
ASP H:47 H:47 72.0 0.48 E -158.4 166.6 NA NA NA
1nkr 1 P43626 81.59 3e-114 X-RAY
 1998-11-11 ASP A:48 A:47 72.0 0.48 E -162.6 155.2 72.0 0.48 0.0 HOH
 2.876
 OD1
 O
1efx 4 P43627 83.25 4e-113 X-RAY
 2000-06-14 ASP D:47 D:47 74.0 0.493 E -172.1 161.3 74.0 0.493 0.0 HOH
 3.169
 OD2
 O
ASP E:47 E:47 81.0 0.54 E -173.4 167.1 80.0 0.533 0.007 D:P43627:0.007
 HOH
 3.347
 OD1
 O
2dl2 1 P43627 83.59 8e-113 X-RAY
 1999-03-30 ASP A:44 A:47 100.0 0.667 -163.6 178.2 100.0 0.667 0.0 HOH
 4.295
 OD1
 O
2dli 1 P43627 83.59 1e-112 X-RAY
 2000-01-13 ASP A:44 A:47 55.0 0.367 -148.6 157.2 55.0 0.367 0.0
3h8n 1 P43632 81.54 2e-112 X-RAY
 2009-10-20 ASN A:42 A:47 60.0 0.375 E -165.0 149.7 60.0 0.375 0.0 HOH
 3.020
 ND2
 O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p43629-f1 1 P43629 100.0 0.0 ASP A:163 A:163 133.0 0.887 -54.2 135.2
af-p43630-f1 1 P43630 85.59 0.0 ASP A:163 A:163 104.0 0.693 -64.9 142.0
af-q14943-f1 1 Q14943 95.15 0.0 ASP A:163 A:163 116.0 0.773 -57.2 137.1
af-a0a0g2jnf4-f1 1 A0A0G2JNF4 87.12 0.0 ASP A:68 A:68 63.0 0.42 E -149.6 153.6
af-p43628-f1 1 P43628 85.53 0.0 ASP A:68 A:68 73.0 0.487 E -148.0 153.6
af-p43632-f1 1 P43632 82.21 6e-170 ASN A:68 A:68 69.0 0.431 E -146.5 151.6
af-a0a0g2jq47-f1 1 A0A0G2JQ47 82.56 1e-169 ASP A:61 A:61 48.0 0.32 E -140.5 168.4
af-q14953-f1 1 Q14953 81.49 9e-166 HIS A:68 A:68 92.0 0.472 E -147.2 143.5
af-a0a0g2jlq3-f1 1 A0A0G2JLQ3 81.49 4e-165 HIS A:68 A:68 95.0 0.487 E -147.2 144.3
af-a0a0g2jng1-f1 1 A0A0G2JNG1 80.43 1e-162 HIS A:68 A:68 92.0 0.472 E -146.8 142.5
af-a0a5f9zh88-f1 1 A0A5F9ZH88 82.41 1e-115 ASP A:45 A:45 52.0 0.347 E -138.6 169.6
af-a0a2r8ycy7-f1 1 A0A2R8YCY7 83.42 5e-115 ASP A:45 A:45 68.0 0.453 E -146.7 156.0
af-a0a5f9z9y6-f1 1 A0A5F9Z9Y6 82.91 4e-114 ASP A:45 A:45 68.0 0.453 E -147.4 153.5
af-a0a376a8z9-f1 1 A0A376A8Z9 82.83 1e-113 HIS A:68 A:68 92.0 0.472 E -146.6 142.9
af-a0a1w2pqf6-f1 1 A0A1W2PQF6 82.91 3e-113 ASP A:45 A:45 70.0 0.467 E -146.1 157.2
af-a0a1w2prs3-f1 1 A0A1W2PRS3 81.91 5e-113 ASP A:45 A:45 74.0 0.493 E -146.2 154.8