Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr19 55331329 . G A CCDS42621.1:NM_013289.2:c.517Gat>Aat_NP_037421.2:p.173D>N Homo sapiens killer cell immunoglobulin like receptor, three Ig domains and long cytoplasmic tail 1 (KIR3DL1), transcript variant 1 (reference allele), mRNA.
pdb_id
label_asym_id
label_seq_id
label_comp_id
auth_asym_id
auth_seq_id
alphafold_id
label_asym_id
label_seq_id
label_comp_id
auth_asym_id
auth_seq_id

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
5t6z 4 P43629 100.0 0.0 X-RAY
2017-03-01 ASP D:152 G:152 149.0 0.993 T 59.9 36.9 149.0 0.993 0.0 HOH
2.879
N
O
5t70 3 P43629 100.0 0.0 X-RAY
2017-03-01 ASP C:152 G:152 142.0 0.947 T 54.6 50.1 142.0 0.947 0.0 HOH
3.036
N
O
6v3j 4 P43629 100.0 0.0 X-RAY
2020-05-20 ASP D:152 G:152 154.0 1.0 T 46.7 44.8 154.0 1.0 0.0 HOH
6.560
O
O
7k80 4 P43629 100.0 0.0 X-RAY
2020-12-09 ASP G:152 G:152 149.0 0.993 T 58.0 38.6 149.0 0.993 0.0
ASP H:152 H:152 154.0 1.0 T 52.9 -107.0 NA NA NA
3vh8 4 P43629 99.67 0.0 X-RAY
2011-10-26 ASP D:169 G:152 151.0 1.0 T 56.1 36.2 151.0 1.0 0.0 HOH
6.148
CB
O
ASP H:169 H:152 172.0 1.0 T 42.2 47.9 NA NA NA
5b39 4 P43629 99.0 0.0 X-RAY
2016-03-30 ASP D:152 G:152 152.0 1.0 T 53.0 36.1 152.0 1.0 0.0
5b38 4 P43629 99.33 0.0 X-RAY
2016-03-30 ASP D:152 G:152 139.0 0.927 T 54.3 33.2 139.0 0.927 0.0
3wuw 4 P43629 100.0 0.0 X-RAY
2014-05-28 ASP D:161 G:152 150.0 1.0 T 59.8 36.9 150.0 1.0 0.0 HOH
6.368
CB
O
7k81 4 I6LEL9 99.31 0.0 X-RAY
2020-12-09 ASP D:147 G:152 149.0 0.993 T 58.5 39.3 149.0 0.993 0.0 NAG
9.917
N
O7
1b6u 1 P43628 84.23 8e-133 X-RAY
1999-01-27 ASP A:57 A:57 166.0 1.0 T -13.7 118.8 166.0 1.0 0.0
1im9 4 P43626 82.67 1e-131 X-RAY
2001-05-30 ASP D:58 D:57 138.0 0.92 S 83.8 54.0 138.0 0.92 0.0
6pag 4 P43628 84.16 5e-119 X-RAY
2020-12-16 ASP D:57 D:57 150.0 1.0 T 55.3 31.0 150.0 1.0 0.0
4n8v 1 P43631 83.58 8e-117 X-RAY
2014-02-05 ASP A:58 NA:NA DO NA DO DO DO NA NA NA
ASP B:58 NA:NA DO NA DO DO DO NA NA NA
1m4k 1 P43631 84.34 1e-116 X-RAY
2003-04-15 ASP A:57 A:57 100.0 NA S -66.3 48.6 100.0 NA NA
7duu 4 P43631 84.34 1e-116 X-RAY
2022-02-02 ASP D:57 D:57 169.0 1.0 S -66.2 124.8 169.0 1.0 0.0 HOH
9.257
N
O
6pa1 4 P43627 83.17 4e-116 X-RAY
2020-12-16 ASP D:57 NA:NA DO NA DO DO DO NA NA NA
ASP H:57 NA:NA DO NA DO DO DO NA NA NA
1nkr 1 P43626 81.59 3e-114 X-RAY
1998-11-11 ASP A:58 A:57 172.0 1.0 T 42.2 73.8 172.0 1.0 0.0 HOH
2.606
OD2
O
1efx 4 P43627 83.25 4e-113 X-RAY
2000-06-14 ASP D:57 D:57 140.0 0.933 T 72.2 40.4 140.0 0.933 0.0 HOH
5.368
N
O
ASP E:57 E:57 142.0 0.947 T 62.6 38.6 142.0 0.947 0.0 HOH
2.887
CB
O
2dl2 1 P43627 83.59 8e-113 X-RAY
1999-03-30 ASP A:54 A:57 157.0 1.0 T 118.5 13.6 157.0 1.0 0.0 HOH
9.500
CB
O
2dli 1 P43627 83.59 1e-112 X-RAY
2000-01-13 ASP A:54 A:57 150.0 1.0 S 62.4 122.2 150.0 1.0 0.0
3h8n 1 P43632 81.54 2e-112 X-RAY
2009-10-20 ASP A:52 A:57 145.0 0.967 T -61.5 147.3 145.0 0.967 0.0

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p43629-f1 1 P43629 100.0 0.0 ASP A:173 A:173 142.0 0.947 T 50.7 39.0
af-p43630-f1 1 P43630 85.59 0.0 ASP A:173 A:173 140.0 0.933 T 49.7 40.5
af-q14943-f1 1 Q14943 95.15 0.0 ASP A:173 A:173 138.0 0.92 T 49.2 38.9
af-a0a0g2jnf4-f1 1 A0A0G2JNF4 87.12 0.0 ASP A:78 A:78 144.0 0.96 T 49.7 36.2
af-p43628-f1 1 P43628 85.53 0.0 ASP A:78 A:78 142.0 0.947 T 49.5 39.2
af-p43632-f1 1 P43632 82.21 6e-170 ASP A:78 A:78 141.0 0.94 T 49.1 37.5
af-a0a0g2jq47-f1 1 A0A0G2JQ47 82.56 1e-169 ASP A:71 A:71 143.0 0.953 T 49.7 38.0
af-q14953-f1 1 Q14953 81.49 9e-166 ASP A:78 A:78 165.0 1.0 T 51.7 36.0
af-a0a0g2jlq3-f1 1 A0A0G2JLQ3 81.49 4e-165 ASP A:78 A:78 161.0 1.0 T 50.9 34.7
af-a0a0g2jng1-f1 1 A0A0G2JNG1 80.43 1e-162 ASP A:78 A:78 162.0 1.0 T 51.1 34.2
af-a0a5f9zh88-f1 1 A0A5F9ZH88 82.41 1e-115 ASP A:55 A:55 139.0 0.927 T 48.6 37.2
af-a0a2r8ycy7-f1 1 A0A2R8YCY7 83.42 5e-115 ASP A:55 A:55 142.0 0.947 T 49.0 37.4
af-a0a5f9z9y6-f1 1 A0A5F9Z9Y6 82.91 4e-114 ASP A:55 A:55 150.0 1.0 T 51.9 46.3
af-a0a376a8z9-f1 1 A0A376A8Z9 82.83 1e-113 ASP A:78 A:78 165.0 1.0 T 51.0 36.7
af-a0a1w2pqf6-f1 1 A0A1W2PQF6 82.91 3e-113 ASP A:55 A:55 138.0 0.92 T 46.7 41.0
af-a0a1w2prs3-f1 1 A0A1W2PRS3 81.91 5e-113 ASP A:55 A:55 157.0 1.0 T 51.3 44.4