Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr19 55333079 . A C CCDS42621.1:NM_013289.2:c.715Agc>Cgc_NP_037421.2:p.239S>R Homo sapiens killer cell immunoglobulin like receptor, three Ig domains and long cytoplasmic tail 1 (KIR3DL1), transcript variant 1 (reference allele), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
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alphafold_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
5t6z 4 P43629 100.0 0.0 X-RAY
 2017-03-01 SER D:218 G:218 106.0 0.922 -82.1 144.0 106.0 0.922 0.0 HOH
 2.191
 O
 O
5t70 3 P43629 100.0 0.0 X-RAY
 2017-03-01 SER C:218 G:218 89.0 0.774 -80.0 152.5 89.0 0.774 0.0 HOH
 3.311
 OG
 O
6v3j 4 P43629 100.0 0.0 X-RAY
 2020-05-20 SER D:218 G:218 92.0 0.8 -87.7 135.7 92.0 0.8 0.0 HOH
 3.815
 CB
 O
7k80 4 P43629 100.0 0.0 X-RAY
 2020-12-09 SER G:218 G:218 56.0 0.487 E -110.6 130.7 56.0 0.487 0.0
SER H:218 H:218 167.0 1.0 360.0 87.5 NA NA NA
3vh8 4 P43629 99.67 0.0 X-RAY
 2011-10-26 SER D:235 G:218 105.0 0.913 -80.2 144.6 105.0 0.913 0.0 HOH
 4.047
 N
 O
SER H:235 NA:NA DO NA DO DO DO NA NA NA
5b39 4 P43629 99.0 0.0 X-RAY
 2016-03-30 SER D:218 G:218 89.0 0.774 -84.7 150.5 89.0 0.774 0.0 HOH
 4.397
 CA
 O
5b38 4 P43629 99.33 0.0 X-RAY
 2016-03-30 SER D:218 G:218 171.0 1.0 360.0 136.6 171.0 1.0 0.0 HOH
 3.256
 CB
 O
3wuw 4 P43629 100.0 0.0 X-RAY
 2014-05-28 SER D:227 G:218 103.0 0.896 -80.5 142.7 103.0 0.896 0.0 HOH
 9.301
 O
 O
7k81 4 I6LEL9 99.31 0.0 X-RAY
 2020-12-09 SER D:213 G:218 139.0 1.0 360.0 41.1 139.0 1.0 0.0 HOH
 3.383
 CB
 O
1b6u 1 P43628 84.23 8e-133 X-RAY
 1999-01-27 SER A:123 A:123 71.0 0.617 E -82.3 144.3 39.0 0.339 0.278 A:P43628:0.278
1im9 4 P43626 82.67 1e-131 X-RAY
 2001-05-30 ASN D:124 D:123 103.0 0.644 E -113.8 135.2 103.0 0.644 0.0 HOH
 7.023
 OD1
 O
6pag 4 P43628 84.16 5e-119 X-RAY
 2020-12-16 SER D:123 NA:NA DO NA DO DO DO NA NA NA
4n8v 1 P43631 83.58 8e-117 X-RAY
 2014-02-05 SER A:124 G:123 68.0 0.591 E -80.4 156.4 68.0 0.591 0.0 HOH
 3.585
 CB
 O
SER B:124 I:123 65.0 0.565 E -80.0 155.7 NA NA NA
1m4k 1 P43631 84.34 1e-116 X-RAY
 2003-04-15 SER A:123 A:123 70.0 0.609 E -82.0 136.8 70.0 0.609 0.0 HOH
 5.852
 O
 O
7duu 4 P43631 84.34 1e-116 X-RAY
 2022-02-02 SER D:123 D:123 72.0 0.626 E -73.5 148.0 72.0 0.626 0.0
6pa1 4 P43627 83.17 4e-116 X-RAY
 2020-12-16 SER D:123 D:123 41.0 0.357 -97.6 158.5 41.0 0.357 0.0
SER H:123 H:123 46.0 0.4 -98.2 157.9 NA NA NA
1nkr 1 P43626 81.59 3e-114 X-RAY
 1998-11-11 ASN A:124 A:123 103.0 0.644 E -81.4 105.8 103.0 0.644 0.0 HOH
 2.478
 OD1
 O
1efx 4 P43627 83.25 4e-113 X-RAY
 2000-06-14 SER D:123 D:123 80.0 0.696 E -84.4 132.5 80.0 0.696 0.0 HOH
 8.244
 CA
 O
SER E:123 E:123 66.0 0.574 E -84.1 128.4 66.0 0.574 0.0 HOH
 8.203
 C
 O
2dl2 1 P43627 83.59 8e-113 X-RAY
 1999-03-30 SER A:120 A:123 75.0 0.652 B -115.3 102.1 75.0 0.652 0.0 HOH
 8.952
 C
 O
2dli 1 P43627 83.59 1e-112 X-RAY
 2000-01-13 SER A:120 A:123 81.0 0.704 E -48.8 121.0 81.0 0.704 0.0
3h8n 1 P43632 81.54 2e-112 X-RAY
 2009-10-20 ASN A:118 A:123 73.0 0.456 E -87.9 142.0 73.0 0.456 0.0 HOH
 3.142
 N
 O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p43629-f1 1 P43629 100.0 0.0 SER A:239 A:239 76.0 0.661 E -82.9 127.7
af-p43630-f1 1 P43630 85.59 0.0 ASN A:239 A:239 110.0 0.688 E -77.5 124.4
af-q14943-f1 1 Q14943 95.15 0.0 SER A:239 A:239 76.0 0.661 E -83.5 126.0
af-a0a0g2jnf4-f1 1 A0A0G2JNF4 87.12 0.0 SER A:144 A:144 77.0 0.67 E -80.2 128.6
af-p43628-f1 1 P43628 85.53 0.0 SER A:144 A:144 79.0 0.687 E -77.4 126.9
af-p43632-f1 1 P43632 82.21 6e-170 ASN A:144 A:144 109.0 0.681 E -76.2 128.4
af-a0a0g2jq47-f1 1 A0A0G2JQ47 82.56 1e-169 ASN A:137 A:137 110.0 0.688 E -76.6 126.6
af-q14953-f1 1 Q14953 81.49 9e-166 SER A:144 A:144 69.0 0.6 -93.1 142.0
af-a0a0g2jlq3-f1 1 A0A0G2JLQ3 81.49 4e-165 SER A:144 A:144 71.0 0.617 -88.0 139.7
af-a0a0g2jng1-f1 1 A0A0G2JNG1 80.43 1e-162 SER A:144 A:144 78.0 0.678 -100.6 146.9
af-a0a5f9zh88-f1 1 A0A5F9ZH88 82.41 1e-115 SER A:121 A:121 77.0 0.67 E -81.2 124.2
af-a0a2r8ycy7-f1 1 A0A2R8YCY7 83.42 5e-115 SER A:121 A:121 78.0 0.678 E -81.5 126.1
af-a0a5f9z9y6-f1 1 A0A5F9Z9Y6 82.91 4e-114 SER A:121 A:121 74.0 0.643 E -77.7 127.0
af-a0a376a8z9-f1 1 A0A376A8Z9 82.83 1e-113 SER A:144 A:144 70.0 0.609 -92.9 138.8
af-a0a1w2pqf6-f1 1 A0A1W2PQF6 82.91 3e-113 SER A:120 A:120 77.0 0.67 E -83.3 126.6
af-a0a1w2prs3-f1 1 A0A1W2PRS3 81.91 5e-113 SER A:121 A:121 74.0 0.643 E -79.1 134.4