Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr19 55333131 . C A CCDS42621.1:NM_013289.2:c.767tCc>tAc_NP_037421.2:p.256S>Y Homo sapiens killer cell immunoglobulin like receptor, three Ig domains and long cytoplasmic tail 1 (KIR3DL1), transcript variant 1 (reference allele), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
5t6z 4 P43629 100.0 0.0 X-RAY
 2017-03-01 SER D:235 G:235 20.0 0.174 E -116.6 134.1 20.0 0.174 0.0 HOH
 6.052
 CB
 O
5t70 3 P43629 100.0 0.0 X-RAY
 2017-03-01 SER C:235 G:235 17.0 0.148 E -117.6 130.9 17.0 0.148 0.0 HOH
 3.402
 O
 O
6v3j 4 P43629 100.0 0.0 X-RAY
 2020-05-20 SER D:235 G:235 24.0 0.209 E -125.2 130.4 24.0 0.209 0.0 HOH
 3.953
 CA
 O
7k80 4 P43629 100.0 0.0 X-RAY
 2020-12-09 SER G:235 G:235 14.0 0.122 E -123.1 119.3 14.0 0.122 0.0 HOH
 2.876
 O
 O
SER H:235 H:235 20.0 0.174 E -134.9 113.1 NA NA NA
3vh8 4 P43629 99.67 0.0 X-RAY
 2011-10-26 SER D:252 G:235 23.0 0.2 E -116.9 133.7 23.0 0.2 0.0 HOH
 3.955
 OG
 O
SER H:252 H:235 30.0 0.261 E -134.7 120.2 NA NA NA
5b39 4 P43629 99.0 0.0 X-RAY
 2016-03-30 SER D:235 G:235 37.0 0.322 E -129.1 133.7 37.0 0.322 0.0 HOH
 6.833
 CB
 O
5b38 4 P43629 99.33 0.0 X-RAY
 2016-03-30 SER D:235 G:235 35.0 0.304 E -140.9 130.3 35.0 0.304 0.0 HOH
 7.575
 CB
 O
3wuw 4 P43629 100.0 0.0 X-RAY
 2014-05-28 SER D:244 G:235 19.0 0.165 E -116.9 134.4 19.0 0.165 0.0 HOH
 6.815
 CB
 O
7k81 4 I6LEL9 99.31 0.0 X-RAY
 2020-12-09 SER D:230 G:235 45.0 0.391 E -131.3 132.7 45.0 0.391 0.0 HOH
 2.891
 OG
 O
1b6u 1 P43628 84.23 8e-133 X-RAY
 1999-01-27 SER A:140 A:140 16.0 0.139 E -111.1 108.2 16.0 0.139 0.0
1im9 4 P43626 82.67 1e-131 X-RAY
 2001-05-30 SER D:141 D:140 13.0 0.113 E -116.7 139.6 13.0 0.113 0.0 HOH
 3.052
 CA
 O
6pag 4 P43628 84.16 5e-119 X-RAY
 2020-12-16 SER D:140 D:140 33.0 0.287 -170.2 164.2 33.0 0.287 0.0
4n8v 1 P43631 83.58 8e-117 X-RAY
 2014-02-05 SER A:141 G:140 19.0 0.165 E -113.6 140.6 19.0 0.165 0.0 HOH
 4.062
 C
 O
SER B:141 I:140 19.0 0.165 E -112.5 139.3 NA NA NA
1m4k 1 P43631 84.34 1e-116 X-RAY
 2003-04-15 SER A:140 A:140 22.0 0.191 E -122.0 151.5 22.0 0.191 0.0 HOH
 3.481
 CA
 O
7duu 4 P43631 84.34 1e-116 X-RAY
 2022-02-02 SER D:140 D:140 3.0 0.026 E -134.6 123.3 3.0 0.026 0.0
6pa1 4 P43627 83.17 4e-116 X-RAY
 2020-12-16 SER D:140 D:140 8.0 0.07 E -136.9 165.6 8.0 0.07 0.0
SER H:140 H:140 12.0 0.104 E -137.6 156.0 NA NA NA
1nkr 1 P43626 81.59 3e-114 X-RAY
 1998-11-11 SER A:141 A:140 19.0 0.165 E -113.7 131.9 19.0 0.165 0.0 HOH
 3.205
 O
 O
1efx 4 P43627 83.25 4e-113 X-RAY
 2000-06-14 SER D:140 D:140 17.0 0.148 E -117.2 141.0 17.0 0.148 0.0 HOH
 5.106
 C
 O
SER E:140 E:140 3.0 0.026 E -114.9 138.6 3.0 0.026 0.0 HOH
 6.302
 N
 O
2dl2 1 P43627 83.59 8e-113 X-RAY
 1999-03-30 SER A:137 A:140 11.0 0.096 -97.5 153.7 11.0 0.096 0.0 HOH
 6.824
 OG
 O
2dli 1 P43627 83.59 1e-112 X-RAY
 2000-01-13 SER A:137 A:140 10.0 0.087 E -90.0 128.0 10.0 0.087 0.0 HOH
 6.468
 OG
 O
3h8n 1 P43632 81.54 2e-112 X-RAY
 2009-10-20 SER A:135 A:140 11.0 0.096 E -112.8 128.0 11.0 0.096 0.0 HOH
 2.716
 OG
 O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p43629-f1 1 P43629 100.0 0.0 SER A:256 A:256 15.0 0.13 E -102.8 149.0
af-p43630-f1 1 P43630 85.59 0.0 SER A:256 A:256 16.0 0.139 E -106.4 148.7
af-q14943-f1 1 Q14943 95.15 0.0 SER A:256 A:256 17.0 0.148 E -105.4 149.0
af-a0a0g2jnf4-f1 1 A0A0G2JNF4 87.12 0.0 SER A:161 A:161 13.0 0.113 E -103.8 148.9
af-p43628-f1 1 P43628 85.53 0.0 SER A:161 A:161 13.0 0.113 E -103.5 149.0
af-p43632-f1 1 P43632 82.21 6e-170 SER A:161 A:161 13.0 0.113 E -100.8 150.6
af-a0a0g2jq47-f1 1 A0A0G2JQ47 82.56 1e-169 SER A:154 A:154 15.0 0.13 E -102.1 150.4
af-q14953-f1 1 Q14953 81.49 9e-166 SER A:161 A:161 14.0 0.122 E -103.3 151.0
af-a0a0g2jlq3-f1 1 A0A0G2JLQ3 81.49 4e-165 SER A:161 A:161 14.0 0.122 E -105.4 151.0
af-a0a0g2jng1-f1 1 A0A0G2JNG1 80.43 1e-162 SER A:161 A:161 14.0 0.122 E -104.0 150.6
af-a0a5f9zh88-f1 1 A0A5F9ZH88 82.41 1e-115 SER A:138 A:138 17.0 0.148 E -102.5 145.7
af-a0a2r8ycy7-f1 1 A0A2R8YCY7 83.42 5e-115 SER A:138 A:138 16.0 0.139 E -105.8 145.5
af-a0a5f9z9y6-f1 1 A0A5F9Z9Y6 82.91 4e-114 SER A:138 A:138 16.0 0.139 E -107.0 146.5
af-a0a376a8z9-f1 1 A0A376A8Z9 82.83 1e-113 SER A:161 A:161 17.0 0.148 E -104.7 150.5
af-a0a1w2pqf6-f1 1 A0A1W2PQF6 82.91 3e-113 SER A:137 A:137 15.0 0.13 E -104.0 147.5
af-a0a1w2prs3-f1 1 A0A1W2PRS3 81.91 5e-113 SER A:138 A:138 19.0 0.165 E -104.2 148.3