Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr19 55333139 . G A CCDS42621.1:NM_013289.2:c.775Ggg>Agg_NP_037421.2:p.259G>R Homo sapiens killer cell immunoglobulin like receptor, three Ig domains and long cytoplasmic tail 1 (KIR3DL1), transcript variant 1 (reference allele), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
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alphafold_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
5t6z 4 P43629 100.0 0.0 X-RAY
 2017-03-01 GLY D:238 G:238 83.0 1.0 T 112.9 6.2 83.0 1.0 0.0 HOH
 4.983
 N
 O
5t70 3 P43629 100.0 0.0 X-RAY
 2017-03-01 GLY C:238 G:238 64.0 0.853 S 88.5 58.3 64.0 0.853 0.0 HOH
 4.906
 N
 O
6v3j 4 P43629 100.0 0.0 X-RAY
 2020-05-20 GLY D:238 G:238 57.0 0.76 S 72.2 173.9 57.0 0.76 0.0 HOH
 3.105
 C
 O
7k80 4 P43629 100.0 0.0 X-RAY
 2020-12-09 GLY G:238 G:238 89.0 1.0 S 77.9 -22.6 89.0 1.0 0.0 HOH
 5.876
 N
 O
GLY H:238 H:238 67.0 0.893 T -91.9 -12.6 NA NA NA
3vh8 4 P43629 99.67 0.0 X-RAY
 2011-10-26 GLY D:255 G:238 77.0 1.0 T 112.5 6.0 77.0 1.0 0.0 HOH
 4.694
 N
 O
GLY H:255 H:238 108.0 1.0 113.8 360.0 NA NA NA
5b39 4 P43629 99.0 0.0 X-RAY
 2016-03-30 GLY D:238 G:238 111.0 1.0 75.5 360.0 111.0 1.0 0.0 HOH
 2.543
 O
 O
5b38 4 P43629 99.33 0.0 X-RAY
 2016-03-30 GLY D:238 G:238 82.0 1.0 T 100.7 29.1 82.0 1.0 0.0 HOH
 3.155
 C
 O
3wuw 4 P43629 100.0 0.0 X-RAY
 2014-05-28 GLY D:247 G:238 51.0 0.68 T -72.4 6.2 51.0 0.68 0.0 HOH
 8.978
 C
 O
7k81 4 I6LEL9 99.31 0.0 X-RAY
 2020-12-09 GLY D:233 G:238 84.0 1.0 T 64.3 21.3 84.0 1.0 0.0 HOH
 5.151
 N
 O
1b6u 1 P43628 84.23 8e-133 X-RAY
 1999-01-27 GLY A:143 A:143 76.0 1.0 T 72.9 -39.5 76.0 1.0 0.0
1im9 4 P43626 82.67 1e-131 X-RAY
 2001-05-30 GLY D:144 D:143 85.0 1.0 T 111.2 -19.0 85.0 1.0 0.0 HOH
 5.058
 N
 O
6pag 4 P43628 84.16 5e-119 X-RAY
 2020-12-16 GLY D:143 NA:NA DO NA DO DO DO NA NA NA
4n8v 1 P43631 83.58 8e-117 X-RAY
 2014-02-05 GLY A:144 G:143 82.0 1.0 T -91.7 20.2 82.0 1.0 0.0 HOH
 3.811
 N
 O
GLY B:144 I:143 80.0 1.0 T -91.1 19.2 NA NA NA
1m4k 1 P43631 84.34 1e-116 X-RAY
 2003-04-15 GLY A:143 A:143 95.0 1.0 T 86.4 0.2 95.0 1.0 0.0 EDO
HOH
 4.744
3.014
 O
N
 O2
O
7duu 4 P43631 84.34 1e-116 X-RAY
 2022-02-02 GLY D:143 NA:NA DO NA DO DO DO NA NA NA
6pa1 4 P43627 83.17 4e-116 X-RAY
 2020-12-16 GLY D:143 NA:NA DO NA DO DO DO NA NA NA
GLY H:143 H:143 27.0 0.36 68.8 32.5 NA NA NA
1nkr 1 P43626 81.59 3e-114 X-RAY
 1998-11-11 GLY A:144 A:143 94.0 1.0 T 75.8 1.4 94.0 1.0 0.0 HOH
 3.078
 N
 O
1efx 4 P43627 83.25 4e-113 X-RAY
 2000-06-14 GLY D:143 D:143 71.0 0.947 T -90.0 53.2 71.0 0.947 0.0 HOH
 6.651
 N
 O
GLY E:143 E:143 50.0 0.667 T 43.6 -0.6 50.0 0.667 0.0 HOH
 4.044
 O
 O
2dl2 1 P43627 83.59 8e-113 X-RAY
 1999-03-30 GLY A:140 A:143 60.0 0.8 S 108.8 -16.3 60.0 0.8 0.0 HOH
 6.815
 N
 O
2dli 1 P43627 83.59 1e-112 X-RAY
 2000-01-13 GLY A:140 A:143 77.0 1.0 S 135.1 -63.6 77.0 1.0 0.0 HOH
 5.667
 N
 O
3h8n 1 P43632 81.54 2e-112 X-RAY
 2009-10-20 GLY A:138 A:143 86.0 1.0 T 95.3 5.9 86.0 1.0 0.0 HOH
 4.967
 N
 O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p43629-f1 1 P43629 100.0 0.0 GLY A:259 A:259 89.0 1.0 T 71.3 0.4
af-p43630-f1 1 P43630 85.59 0.0 GLY A:259 A:259 87.0 1.0 T 87.6 -10.4
af-q14943-f1 1 Q14943 95.15 0.0 GLY A:259 A:259 90.0 1.0 T 70.9 1.7
af-a0a0g2jnf4-f1 1 A0A0G2JNF4 87.12 0.0 GLY A:164 A:164 80.0 1.0 T 83.6 -5.7
af-p43628-f1 1 P43628 85.53 0.0 GLY A:164 A:164 81.0 1.0 T 83.3 -6.1
af-p43632-f1 1 P43632 82.21 6e-170 GLY A:164 A:164 82.0 1.0 T 83.5 -4.9
af-a0a0g2jq47-f1 1 A0A0G2JQ47 82.56 1e-169 GLY A:157 A:157 82.0 1.0 T 82.0 -8.5
af-q14953-f1 1 Q14953 81.49 9e-166 GLY A:164 A:164 89.0 1.0 T 85.1 -2.4
af-a0a0g2jlq3-f1 1 A0A0G2JLQ3 81.49 4e-165 GLY A:164 A:164 85.0 1.0 T 82.4 -1.9
af-a0a0g2jng1-f1 1 A0A0G2JNG1 80.43 1e-162 GLY A:164 A:164 84.0 1.0 T 82.4 -2.4
af-a0a5f9zh88-f1 1 A0A5F9ZH88 82.41 1e-115 GLY A:141 A:141 86.0 1.0 T 84.2 -4.5
af-a0a2r8ycy7-f1 1 A0A2R8YCY7 83.42 5e-115 GLY A:141 A:141 85.0 1.0 T 84.6 -7.0
af-a0a5f9z9y6-f1 1 A0A5F9Z9Y6 82.91 4e-114 GLY A:141 A:141 86.0 1.0 T 84.2 -10.4
af-a0a376a8z9-f1 1 A0A376A8Z9 82.83 1e-113 GLY A:164 A:164 90.0 1.0 T 84.1 -2.9
af-a0a1w2pqf6-f1 1 A0A1W2PQF6 82.91 3e-113 GLY A:140 A:140 86.0 1.0 T 83.4 -4.4
af-a0a1w2prs3-f1 1 A0A1W2PRS3 81.91 5e-113 GLY A:141 A:141 86.0 1.0 T 87.0 -5.5