Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr19 55333170 . T A CCDS42621.1:NM_013289.2:c.806gTg>gAg_NP_037421.2:p.269V>E Homo sapiens killer cell immunoglobulin like receptor, three Ig domains and long cytoplasmic tail 1 (KIR3DL1), transcript variant 1 (reference allele), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
5t6z 4 P43629 100.0 0.0 X-RAY
 2017-03-01 VAL D:248 G:248 81.0 0.523 E -123.3 134.5 81.0 0.523 0.0 NAG
HOH
 8.033
3.528
 O
C
 C6
O
5t70 3 P43629 100.0 0.0 X-RAY
 2017-03-01 VAL C:248 G:248 88.0 0.568 E -125.7 130.4 88.0 0.568 0.0 NAG
HOH
 8.240
3.760
 O
C
 C6
O
6v3j 4 P43629 100.0 0.0 X-RAY
 2020-05-20 VAL D:248 G:248 76.0 0.49 E -121.1 127.9 76.0 0.49 0.0 NAG
HOH
 8.703
3.924
 O
CA
 O6
O
7k80 4 P43629 100.0 0.0 X-RAY
 2020-12-09 VAL G:248 G:248 77.0 0.497 E -129.0 130.2 77.0 0.497 0.0 NAG
 7.430
 O
 O6
VAL H:248 H:248 93.0 0.6 E -122.8 139.0 NA NA NA
3vh8 4 P43629 99.67 0.0 X-RAY
 2011-10-26 VAL D:265 G:248 81.0 0.523 E -123.3 134.6 81.0 0.523 0.0 NAG
HOH
 7.862
3.764
 O
CG2
 C6
O
VAL H:265 H:248 72.0 0.465 E -115.7 141.3 NA NA NA
5b39 4 P43629 99.0 0.0 X-RAY
 2016-03-30 VAL D:248 G:248 86.0 0.555 E -119.4 136.2 86.0 0.555 0.0 NAG
HOH
 8.322
8.176
 O
C
 O6
O
5b38 4 P43629 99.33 0.0 X-RAY
 2016-03-30 VAL D:248 G:248 87.0 0.561 E -109.4 126.7 87.0 0.561 0.0 NAG
HOH
 8.075
4.766
 O
CG1
 O6
O
3wuw 4 P43629 100.0 0.0 X-RAY
 2014-05-28 VAL D:257 G:248 84.0 0.542 E -122.9 134.5 84.0 0.542 0.0 NAG
HOH
 7.745
6.434
 O
O
 C6
O
7k81 4 I6LEL9 99.31 0.0 X-RAY
 2020-12-09 VAL D:243 G:248 73.0 0.471 E -109.7 132.4 73.0 0.471 0.0 NAG
HOH
 7.619
3.653
 O
CG2
 O6
O
1b6u 1 P43628 84.23 8e-133 X-RAY
 1999-01-27 GLY A:153 A:153 40.0 0.533 B -111.8 79.3 40.0 0.533 0.0
1im9 4 P43626 82.67 1e-131 X-RAY
 2001-05-30 GLY D:154 D:153 27.0 0.36 E -91.4 150.0 27.0 0.36 0.0 HOH
 5.962
 N
 O
6pag 4 P43628 84.16 5e-119 X-RAY
 2020-12-16 GLY D:153 D:153 29.0 0.387 E -130.2 119.4 29.0 0.387 0.0
4n8v 1 P43631 83.58 8e-117 X-RAY
 2014-02-05 GLY A:154 G:153 33.0 0.44 -75.7 -176.4 33.0 0.44 0.0 HOH
 3.915
 CA
 O
GLY B:154 I:153 31.0 0.413 E -127.7 140.9 NA NA NA
1m4k 1 P43631 84.34 1e-116 X-RAY
 2003-04-15 GLY A:153 A:153 25.0 0.333 85.8 -148.9 25.0 0.333 0.0 SO4
HOH
 9.932
3.159
 O
O
 O1
O
7duu 4 P43631 84.34 1e-116 X-RAY
 2022-02-02 GLY D:153 D:153 26.0 0.347 E -96.5 105.2 26.0 0.347 0.0 HOH
 6.205
 N
 O
6pa1 4 P43627 83.17 4e-116 X-RAY
 2020-12-16 GLY D:153 D:153 39.0 0.52 B -67.0 142.5 39.0 0.52 0.0
GLY H:153 H:153 38.0 0.507 B -88.4 144.7 NA NA NA
1nkr 1 P43626 81.59 3e-114 X-RAY
 1998-11-11 GLY A:154 A:153 26.0 0.347 E -77.9 153.7 26.0 0.347 0.0 HOH
 3.400
 CA
 O
1efx 4 P43627 83.25 4e-113 X-RAY
 2000-06-14 GLY D:153 D:153 33.0 0.44 E -110.7 106.8 33.0 0.44 0.0 HOH
 5.809
 C
 O
GLY E:153 E:153 24.0 0.32 B -90.9 133.4 24.0 0.32 0.0 HOH
 5.058
 O
 O
2dl2 1 P43627 83.59 8e-113 X-RAY
 1999-03-30 GLY A:150 A:153 27.0 0.36 -94.2 156.3 27.0 0.36 0.0 HOH
 4.906
 N
 O
2dli 1 P43627 83.59 1e-112 X-RAY
 2000-01-13 GLY A:150 A:153 34.0 0.453 B -88.2 141.7 34.0 0.453 0.0 HOH
 6.117
 N
 O
3h8n 1 P43632 81.54 2e-112 X-RAY
 2009-10-20 VAL A:148 A:153 101.0 0.652 E -97.0 146.2 101.0 0.652 0.0 HOH
 4.497
 CG1
 O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p43629-f1 1 P43629 100.0 0.0 VAL A:269 A:269 95.0 0.613 E -111.0 128.8
af-p43630-f1 1 P43630 85.59 0.0 VAL A:269 A:269 90.0 0.581 E -115.4 128.8
af-q14943-f1 1 Q14943 95.15 0.0 VAL A:269 A:269 93.0 0.6 E -108.5 128.3
af-a0a0g2jnf4-f1 1 A0A0G2JNF4 87.12 0.0 GLY A:174 A:174 30.0 0.4 -72.9 -179.0
af-p43628-f1 1 P43628 85.53 0.0 GLY A:174 A:174 32.0 0.427 -72.7 -177.8
af-p43632-f1 1 P43632 82.21 6e-170 VAL A:174 A:174 96.0 0.619 E -111.0 129.3
af-a0a0g2jq47-f1 1 A0A0G2JQ47 82.56 1e-169 GLY A:167 A:167 40.0 0.533 -73.5 -174.4
af-q14953-f1 1 Q14953 81.49 9e-166 GLY A:174 A:174 32.0 0.427 -70.5 -177.6
af-a0a0g2jlq3-f1 1 A0A0G2JLQ3 81.49 4e-165 GLY A:174 A:174 31.0 0.413 -68.8 -179.3
af-a0a0g2jng1-f1 1 A0A0G2JNG1 80.43 1e-162 GLY A:174 A:174 33.0 0.44 -68.6 178.6
af-a0a5f9zh88-f1 1 A0A5F9ZH88 82.41 1e-115 GLY A:151 A:151 32.0 0.427 -70.2 -178.4
af-a0a2r8ycy7-f1 1 A0A2R8YCY7 83.42 5e-115 GLY A:151 A:151 31.0 0.413 -70.0 -178.7
af-a0a5f9z9y6-f1 1 A0A5F9Z9Y6 82.91 4e-114 GLY A:151 A:151 33.0 0.44 -71.7 -179.6
af-a0a376a8z9-f1 1 A0A376A8Z9 82.83 1e-113 GLY A:174 A:174 32.0 0.427 -70.4 -176.5
af-a0a1w2pqf6-f1 1 A0A1W2PQF6 82.91 3e-113 GLY A:150 A:150 32.0 0.427 -70.3 -178.3
af-a0a1w2prs3-f1 1 A0A1W2PRS3 81.91 5e-113 VAL A:151 A:151 81.0 0.523 E -119.9 127.9