Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr19 55365276 . T A CCDS12906.1:NM_006737.3:c.430Tgt>Agt_NP_006728.2:p.144C>S Homo sapiens killer cell immunoglobulin like receptor, three Ig domains and long cytoplasmic tail 2 (KIR3DL2), transcript variant 1, mRNA.
pdb_id
label_asym_id
label_seq_id
label_comp_id
auth_asym_id
auth_seq_id
alphafold_id
label_asym_id
label_seq_id
label_comp_id
auth_asym_id
auth_seq_id

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
5t6z 4 P43629 86.24 0.0 X-RAY
2017-03-01 CYS D:123 G:123 0.0 0.0 E -103.6 140.3 0.0 0.0 0.0 NAG
HOH
7.565
5.406
O
O
O7
O
5t70 3 P43629 86.24 0.0 X-RAY
2017-03-01 CYS C:123 G:123 0.0 0.0 E -105.3 130.0 0.0 0.0 0.0 NAG
HOH
7.826
6.062
N
O
C1
O
6v3j 4 P43629 86.24 0.0 X-RAY
2020-05-20 CYS D:123 G:123 0.0 0.0 E -106.6 135.5 0.0 0.0 0.0 NAG
HOH
7.901
7.487
N
O
C1
O
7k80 4 P43629 86.24 0.0 X-RAY
2020-12-09 CYS G:123 G:123 0.0 0.0 E -109.9 135.0 0.0 0.0 0.0 NAG
HOH
8.097
7.052
O
N
O7
O
CYS H:123 H:123 0.0 0.0 E -108.5 140.5 NA NA NA
3vh8 4 P43629 86.24 0.0 X-RAY
2011-10-26 CYS D:140 G:123 0.0 0.0 E -103.6 140.4 0.0 0.0 0.0 NAG
HOH
7.891
6.150
N
O
C1
O
CYS H:140 H:123 0.0 0.0 E -100.8 135.5 NA NA NA
5b39 4 P43629 85.91 0.0 X-RAY
2016-03-30 CYS D:123 G:123 0.0 0.0 E -113.8 120.3 0.0 0.0 0.0 NAG
7.862
N
O5
5b38 4 P43629 85.57 0.0 X-RAY
2016-03-30 CYS D:123 G:123 0.0 0.0 E -108.6 128.0 0.0 0.0 0.0 NAG
HOH
7.733
7.399
N
O
C1
O
7k81 4 I6LEL9 85.12 1e-179 X-RAY
2020-12-09 CYS D:118 G:123 0.0 0.0 E -96.7 135.0 0.0 0.0 0.0 NAG
HOH
7.851
7.354
N
O
C1
O
3wuw 4 P43629 85.66 1e-179 X-RAY
2014-05-28 CYS D:132 G:123 0.0 0.0 E -103.2 139.2 0.0 0.0 0.0 NAG
HOH
7.903
6.371
O
O
O7
O
1b6u 1 P43628 80.87 5e-130 X-RAY
1999-01-27 CYS A:28 A:28 0.0 0.0 E -101.8 133.5 0.0 0.0 0.0
1im9 4 P43626 82.67 1e-128 X-RAY
2001-05-30 CYS D:29 D:28 1.0 0.007 E -107.4 151.7 1.0 0.007 0.0 HOH
6.145
N
O
6pag 4 P43628 84.65 1e-118 X-RAY
2020-12-16 CYS D:28 D:28 0.0 0.0 E -123.4 125.8 0.0 0.0 0.0
4n8v 1 P43631 84.08 1e-116 X-RAY
2014-02-05 CYS A:29 G:28 0.0 0.0 E -109.4 127.8 0.0 0.0 0.0 HOH
7.988
SG
O
CYS B:29 I:28 0.0 0.0 E -108.2 127.5 NA NA NA
1m4k 1 P43631 84.85 4e-116 X-RAY
2003-04-15 CYS A:28 A:28 0.0 0.0 E -103.0 130.0 0.0 0.0 0.0 HOH
5.837
N
O
7duu 4 P43631 84.85 4e-116 X-RAY
2022-02-02 CYS D:28 D:28 0.0 0.0 E -102.6 140.9 0.0 0.0 0.0 HOH
7.555
O
O
6pa1 4 P43627 83.66 1e-115 X-RAY
2020-12-16 CYS D:28 D:28 0.0 0.0 E -118.4 106.9 0.0 0.0 0.0
CYS H:28 H:28 0.0 0.0 E -118.6 106.3 NA NA NA
3h8n 1 P43632 84.62 1e-114 X-RAY
2009-10-20 CYS A:23 A:28 0.0 0.0 E -117.6 130.9 0.0 0.0 0.0 HOH
8.210
CA
O
1nkr 1 P43626 82.59 1e-113 X-RAY
1998-11-11 CYS A:29 A:28 1.0 0.007 E -99.9 136.5 1.0 0.007 0.0 HOH
6.250
O
O
1efx 4 P43627 83.76 1e-112 X-RAY
2000-06-14 CYS D:28 D:28 0.0 0.0 E -116.9 127.0 0.0 0.0 0.0 HOH
7.381
C
O
CYS E:28 E:28 0.0 0.0 E -114.8 125.6 0.0 0.0 0.0 HOH
8.012
C
O
2dl2 1 P43627 84.1 3e-112 X-RAY
1999-03-30 CYS A:25 A:28 0.0 0.0 -140.2 93.3 0.0 0.0 0.0 HOH
7.782
N
O
2dli 1 P43627 84.1 3e-112 X-RAY
2000-01-13 CYS A:25 A:28 0.0 0.0 E -118.9 108.3 0.0 0.0 0.0

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p43630-f1 1 P43630 100.0 0.0 CYS A:144 A:144 0.0 0.0 E -106.3 135.4
af-p43629-f1 1 P43629 85.59 0.0 CYS A:144 A:144 0.0 0.0 E -106.2 136.0
af-q14943-f1 1 Q14943 84.28 0.0 CYS A:144 A:144 0.0 0.0 E -100.1 133.4
af-a0a191urj7-f1 1 A0A191URJ7 89.61 0.0 CYS A:49 A:49 0.0 0.0 E -92.1 138.4
af-a0a0g2jnf4-f1 1 A0A0G2JNF4 85.58 0.0 CYS A:49 A:49 0.0 0.0 E -91.0 136.4
af-p43626-f1 1 P43626 82.52 0.0 CYS A:49 A:49 0.0 0.0 E -91.1 137.7
af-p43628-f1 1 P43628 84.91 0.0 CYS A:49 A:49 0.0 0.0 E -90.4 136.7
af-p43627-f1 1 P43627 82.21 0.0 CYS A:49 A:49 0.0 0.0 E -98.5 134.5
af-p43631-f1 1 P43631 83.99 1e-169 CYS A:49 A:49 0.0 0.0 E -99.7 135.3
af-p43632-f1 1 P43632 83.27 9e-169 CYS A:49 A:49 0.0 0.0 E -103.3 140.0
af-q14954-f1 1 Q14954 81.85 6e-164 CYS A:49 A:49 0.0 0.0 E -90.8 137.7
af-a0a0g2jq47-f1 1 A0A0G2JQ47 81.85 9e-164 CYS A:42 A:42 0.0 0.0 E -90.9 138.4
af-q14952-f1 1 Q14952 81.14 3e-162 CYS A:49 A:49 0.0 0.0 E -101.9 135.9
af-q14953-f1 1 Q14953 81.49 5e-162 CYS A:49 A:49 0.0 0.0 E -90.5 139.5
af-a0a0g2jlq3-f1 1 A0A0G2JLQ3 81.49 2e-161 CYS A:49 A:49 0.0 0.0 E -90.2 139.5
af-a0a1w2pqm1-f1 1 A0A1W2PQM1 81.14 2e-161 CYS A:49 A:49 0.0 0.0 E -119.6 137.8
af-a0a0g2jng1-f1 1 A0A0G2JNG1 80.43 5e-159 CYS A:49 A:49 0.0 0.0 E -90.2 139.2
af-a0a5f9zh88-f1 1 A0A5F9ZH88 83.42 2e-115 CYS A:26 A:26 0.0 0.0 E -87.6 135.8
af-a0a2r8ycy7-f1 1 A0A2R8YCY7 83.92 1e-114 CYS A:26 A:26 0.0 0.0 E -99.6 135.7
af-a0a5f9z9y6-f1 1 A0A5F9Z9Y6 83.42 9e-114 CYS A:26 A:26 0.0 0.0 E -91.2 136.1
af-a0a1w2pqf6-f1 1 A0A1W2PQF6 83.92 1e-113 CYS A:26 A:26 0.0 0.0 E -87.8 135.6
af-a0a1w2prs3-f1 1 A0A1W2PRS3 82.41 6e-112 CYS A:26 A:26 0.0 0.0 E -90.9 137.8
af-a0a376a8z9-f1 1 A0A376A8Z9 82.83 3e-111 CYS A:49 A:49 0.0 0.0 E -90.5 139.6