Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr19 55365343 . G A CCDS12906.1:NM_006737.3:c.497cGc>cAc_NP_006728.2:p.166R>H Homo sapiens killer cell immunoglobulin like receptor, three Ig domains and long cytoplasmic tail 2 (KIR3DL2), transcript variant 1, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
5t6z 4 P43629 86.24 0.0 X-RAY
 2017-03-01 ARG D:145 G:145 147.0 0.653 E -117.8 140.0 147.0 0.653 0.0 NAG
HOH
 5.855
2.831
 NE
N
 C8
O
5t70 3 P43629 86.24 0.0 X-RAY
 2017-03-01 ARG C:145 G:145 148.0 0.658 E -125.7 145.0 148.0 0.658 0.0 NAG
HOH
 5.288
2.848
 NH1
N
 C8
O
6v3j 4 P43629 86.24 0.0 X-RAY
 2020-05-20 ARG D:145 G:145 152.0 0.676 E -116.4 141.4 152.0 0.676 0.0 NAG
HOH
 5.862
2.607
 NH1
NH1
 O7
O
7k80 4 P43629 86.24 0.0 X-RAY
 2020-12-09 ARG G:145 G:145 149.0 0.662 E -110.3 134.7 149.0 0.662 0.0 NAG
HOH
 4.868
6.617
 NH1
CD
 C8
O
ARG H:145 H:145 142.0 0.631 E -115.3 136.8 NA NA NA
3vh8 4 P43629 86.24 0.0 X-RAY
 2011-10-26 ARG D:162 G:145 146.0 0.649 E -117.0 140.3 146.0 0.649 0.0 NAG
HOH
 5.648
2.841
 NE
O
 C8
O
ARG H:162 H:145 146.0 0.649 E -115.1 136.5 NA NA NA
5b39 4 P43629 85.91 0.0 X-RAY
 2016-03-30 ARG D:145 G:145 148.0 0.658 E -106.5 143.0 148.0 0.658 0.0 NAG
HOH
 6.085
6.703
 NE
N
 C8
O
5b38 4 P43629 85.57 0.0 X-RAY
 2016-03-30 ARG D:145 G:145 151.0 0.671 E -120.5 139.5 151.0 0.671 0.0 NAG
HOH
 5.902
2.762
 NH1
O
 C8
O
7k81 4 I6LEL9 85.12 1e-179 X-RAY
 2020-12-09 ARG D:140 G:145 142.0 0.631 E -117.1 138.5 142.0 0.631 0.0 NAG
HOH
 6.393
2.728
 NH1
O
 C8
O
3wuw 4 P43629 85.66 1e-179 X-RAY
 2014-05-28 ARG D:154 G:145 147.0 0.653 E -117.3 140.0 147.0 0.653 0.0 NAG
HOH
 5.586
2.926
 NE
N
 C8
O
1b6u 1 P43628 80.87 5e-130 X-RAY
 1999-01-27 HIS A:50 A:50 102.0 0.523 E -144.3 136.8 102.0 0.523 0.0
1im9 4 P43626 82.67 1e-128 X-RAY
 2001-05-30 ARG D:51 D:50 140.0 0.622 E -95.2 124.7 140.0 0.622 0.0 HOH
 2.922
 N
 O
6pag 4 P43628 84.65 1e-118 X-RAY
 2020-12-16 HIS D:50 D:50 106.0 0.544 E -121.1 115.1 106.0 0.544 0.0
4n8v 1 P43631 84.08 1e-116 X-RAY
 2014-02-05 HIS A:51 G:50 113.0 0.579 E -110.6 143.3 113.0 0.579 0.0
HIS B:51 I:50 101.0 0.518 E -110.8 143.7 NA NA NA
1m4k 1 P43631 84.85 4e-116 X-RAY
 2003-04-15 HIS A:50 A:50 68.0 0.349 E -127.5 135.1 68.0 0.349 0.0 HOH
 2.751
 O
 O
7duu 4 P43631 84.85 4e-116 X-RAY
 2022-02-02 HIS D:50 D:50 72.0 0.369 E -131.5 137.5 72.0 0.369 0.0 HOH
 6.555
 O
 O
6pa1 4 P43627 83.66 1e-115 X-RAY
 2020-12-16 HIS D:50 D:50 121.0 0.621 E -94.1 144.4 121.0 0.621 0.0
HIS H:50 H:50 108.0 0.554 E -93.9 144.2 NA NA NA
3h8n 1 P43632 84.62 1e-114 X-RAY
 2009-10-20 HIS A:45 A:50 77.0 0.395 E -119.1 140.4 77.0 0.395 0.0 HOH
 4.435
 N
 O
1nkr 1 P43626 82.59 1e-113 X-RAY
 1998-11-11 ARG A:51 A:50 154.0 0.684 E -98.3 120.1 154.0 0.684 0.0 HOH
 2.798
 N
 O
1efx 4 P43627 83.76 1e-112 X-RAY
 2000-06-14 HIS D:50 D:50 84.0 0.431 E -91.1 159.0 84.0 0.431 0.0 HOH
 5.833
 O
 O
HIS E:50 E:50 80.0 0.41 E -89.6 160.0 80.0 0.41 0.0 HOH
 7.369
 N
 O
2dl2 1 P43627 84.1 3e-112 X-RAY
 1999-03-30 HIS A:47 A:50 122.0 0.626 -83.9 16.7 122.0 0.626 0.0 HOH
 4.183
 NE2
 O
2dli 1 P43627 84.1 3e-112 X-RAY
 2000-01-13 HIS A:47 A:50 156.0 0.8 E -102.6 98.6 156.0 0.8 0.0 HOH
 5.093
 CD2
 O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p43630-f1 1 P43630 100.0 0.0 ARG A:166 A:166 150.0 0.667 E -113.7 131.4
af-p43629-f1 1 P43629 85.59 0.0 ARG A:166 A:166 154.0 0.684 E -109.5 132.8
af-q14943-f1 1 Q14943 84.28 0.0 ARG A:166 A:166 152.0 0.676 E -115.2 133.7
af-a0a191urj7-f1 1 A0A191URJ7 89.61 0.0 ARG A:71 A:71 142.0 0.631 E -115.8 131.6
af-a0a0g2jnf4-f1 1 A0A0G2JNF4 85.58 0.0 HIS A:71 A:71 98.0 0.503 E -114.6 137.2
af-p43626-f1 1 P43626 82.52 0.0 ARG A:71 A:71 142.0 0.631 E -114.9 131.8
af-p43628-f1 1 P43628 84.91 0.0 HIS A:71 A:71 98.0 0.503 E -118.9 136.9
af-p43627-f1 1 P43627 82.21 0.0 HIS A:71 A:71 96.0 0.492 E -116.9 137.3
af-p43631-f1 1 P43631 83.99 1e-169 HIS A:71 A:71 108.0 0.554 E -123.3 136.8
af-p43632-f1 1 P43632 83.27 9e-169 HIS A:71 A:71 96.0 0.492 E -123.3 138.7
af-q14954-f1 1 Q14954 81.85 6e-164 ARG A:71 A:71 139.0 0.618 E -122.1 131.9
af-a0a0g2jq47-f1 1 A0A0G2JQ47 81.85 9e-164 ARG A:64 A:64 143.0 0.636 E -118.9 133.3
af-q14952-f1 1 Q14952 81.14 3e-162 ARG A:71 A:71 105.0 0.467 E -123.6 132.7
af-q14953-f1 1 Q14953 81.49 5e-162 ARG A:71 A:71 142.0 0.631 E -129.1 138.5
af-a0a0g2jlq3-f1 1 A0A0G2JLQ3 81.49 2e-161 ARG A:71 A:71 144.0 0.64 E -128.2 137.5
af-a0a1w2pqm1-f1 1 A0A1W2PQM1 81.14 2e-161 HIS A:71 A:71 102.0 0.523 E -124.2 136.1
af-a0a0g2jng1-f1 1 A0A0G2JNG1 80.43 5e-159 ARG A:71 A:71 146.0 0.649 E -129.7 138.2
af-a0a5f9zh88-f1 1 A0A5F9ZH88 83.42 2e-115 ARG A:48 A:48 137.0 0.609 E -126.3 131.5
af-a0a2r8ycy7-f1 1 A0A2R8YCY7 83.92 1e-114 HIS A:48 A:48 100.0 0.513 E -126.1 137.1
af-a0a5f9z9y6-f1 1 A0A5F9Z9Y6 83.42 9e-114 HIS A:48 A:48 93.0 0.477 E -120.7 136.5
af-a0a1w2pqf6-f1 1 A0A1W2PQF6 83.92 1e-113 HIS A:48 A:48 101.0 0.518 E -131.0 131.8
af-a0a1w2prs3-f1 1 A0A1W2PRS3 82.41 6e-112 ARG A:48 A:48 147.0 0.653 E -127.6 132.2
af-a0a376a8z9-f1 1 A0A376A8Z9 82.83 3e-111 ARG A:71 A:71 142.0 0.631 E -130.5 138.5