Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr19 55365348 . G A CCDS12906.1:NM_006737.3:c.502Gtt>Att_NP_006728.2:p.168V>I Homo sapiens killer cell immunoglobulin like receptor, three Ig domains and long cytoplasmic tail 2 (KIR3DL2), transcript variant 1, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
5t6z 4 P43629 86.24 0.0 X-RAY
 2017-03-01 VAL D:147 G:147 79.0 0.51 E -70.8 142.6 79.0 0.51 0.0 NAG
HOH
 8.683
2.653
 O
N
 C8
O
5t70 3 P43629 86.24 0.0 X-RAY
 2017-03-01 VAL C:147 G:147 83.0 0.535 E -69.7 146.3 83.0 0.535 0.0 NAG
HOH
 8.949
2.703
 O
O
 O7
O
6v3j 4 P43629 86.24 0.0 X-RAY
 2020-05-20 VAL D:147 G:147 79.0 0.51 E -78.2 140.5 79.0 0.51 0.0 NAG
HOH
 9.173
2.581
 O
O
 C8
O
7k80 4 P43629 86.24 0.0 X-RAY
 2020-12-09 VAL G:147 G:147 95.0 0.613 E -79.2 138.2 95.0 0.613 0.0 NAG
HOH
 8.787
4.313
 O
O
 C8
O
VAL H:147 H:147 99.0 0.639 E -72.9 139.4 NA NA NA
3vh8 4 P43629 86.24 0.0 X-RAY
 2011-10-26 VAL D:164 G:147 84.0 0.542 E -70.0 143.1 84.0 0.542 0.0 NAG
HOH
 9.183
2.556
 O
O
 C8
O
VAL H:164 H:147 86.0 0.555 E -66.2 139.6 NA NA NA
5b39 4 P43629 85.91 0.0 X-RAY
 2016-03-30 VAL D:147 G:147 78.0 0.503 E -72.2 143.0 78.0 0.503 0.0 HOH
 8.346
 CG1
 O
5b38 4 P43629 85.57 0.0 X-RAY
 2016-03-30 VAL D:147 G:147 73.0 0.471 E -80.5 133.3 73.0 0.471 0.0 NAG
HOH
 9.841
4.913
 O
O
 O7
O
7k81 4 I6LEL9 85.12 1e-179 X-RAY
 2020-12-09 VAL D:142 G:147 79.0 0.51 E -75.7 137.5 79.0 0.51 0.0 NAG
HOH
 7.744
2.830
 O
O
 O7
O
3wuw 4 P43629 85.66 1e-179 X-RAY
 2014-05-28 VAL D:156 G:147 79.0 0.51 E -70.6 143.4 79.0 0.51 0.0 NAG
HOH
 8.614
2.683
 O
O
 C8
O
1b6u 1 P43628 80.87 5e-130 X-RAY
 1999-01-27 ILE A:52 A:52 111.0 0.634 E -71.6 122.6 111.0 0.634 0.0
1im9 4 P43626 82.67 1e-128 X-RAY
 2001-05-30 ILE D:53 D:52 142.0 0.811 E -68.4 134.3 142.0 0.811 0.0 HOH
 7.994
 N
 O
6pag 4 P43628 84.65 1e-118 X-RAY
 2020-12-16 ILE D:52 D:52 78.0 0.446 E -84.8 155.8 78.0 0.446 0.0
4n8v 1 P43631 84.08 1e-116 X-RAY
 2014-02-05 ILE A:53 G:52 103.0 0.589 -86.4 -46.8 103.0 0.589 0.0
ILE B:53 I:52 115.0 0.657 -87.6 -46.7 NA NA NA
1m4k 1 P43631 84.85 4e-116 X-RAY
 2003-04-15 ILE A:52 A:52 107.0 0.611 E -70.2 137.2 107.0 0.611 0.0 HOH
 2.846
 N
 O
7duu 4 P43631 84.85 4e-116 X-RAY
 2022-02-02 ILE D:52 D:52 112.0 0.64 E -62.6 147.2 112.0 0.64 0.0 HOH
 3.212
 O
 O
6pa1 4 P43627 83.66 1e-115 X-RAY
 2020-12-16 ILE D:52 D:52 100.0 0.571 E -96.4 145.2 100.0 0.571 0.0
ILE H:52 H:52 105.0 0.6 E -95.8 144.0 NA NA NA
3h8n 1 P43632 84.62 1e-114 X-RAY
 2009-10-20 ILE A:47 A:52 111.0 0.634 -91.4 46.7 111.0 0.634 0.0
1nkr 1 P43626 82.59 1e-113 X-RAY
 1998-11-11 ILE A:53 A:52 114.0 0.651 E -82.1 130.1 114.0 0.651 0.0 HOH
 2.884
 CD1
 O
1efx 4 P43627 83.76 1e-112 X-RAY
 2000-06-14 ILE D:52 D:52 100.0 0.571 E -75.1 140.2 100.0 0.571 0.0 HOH
 9.437
 N
 O
ILE E:52 E:52 103.0 0.589 E -73.9 147.6 103.0 0.589 0.0
2dl2 1 P43627 84.1 3e-112 X-RAY
 1999-03-30 ILE A:49 A:52 111.0 0.634 B -82.0 -178.0 111.0 0.634 0.0 HOH
 7.808
 N
 O
2dli 1 P43627 84.1 3e-112 X-RAY
 2000-01-13 ILE A:49 A:52 112.0 0.64 -68.6 106.1 112.0 0.64 0.0 HOH
 8.605
 N
 O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p43630-f1 1 P43630 100.0 0.0 VAL A:168 A:168 97.0 0.626 E -74.2 133.6
af-p43629-f1 1 P43629 85.59 0.0 VAL A:168 A:168 94.0 0.606 E -74.0 132.6
af-q14943-f1 1 Q14943 84.28 0.0 VAL A:168 A:168 88.0 0.568 E -74.2 133.3
af-a0a191urj7-f1 1 A0A191URJ7 89.61 0.0 ILE A:73 A:73 113.0 0.646 E -74.9 135.2
af-a0a0g2jnf4-f1 1 A0A0G2JNF4 85.58 0.0 ILE A:73 A:73 100.0 0.571 E -78.3 131.6
af-p43626-f1 1 P43626 82.52 0.0 ILE A:73 A:73 114.0 0.651 E -73.0 135.1
af-p43628-f1 1 P43628 84.91 0.0 ILE A:73 A:73 99.0 0.566 E -78.3 131.2
af-p43627-f1 1 P43627 82.21 0.0 ILE A:73 A:73 105.0 0.6 E -78.6 130.3
af-p43631-f1 1 P43631 83.99 1e-169 ILE A:73 A:73 99.0 0.566 E -77.8 132.0
af-p43632-f1 1 P43632 83.27 9e-169 ILE A:73 A:73 111.0 0.634 E -80.3 133.1
af-q14954-f1 1 Q14954 81.85 6e-164 ILE A:73 A:73 115.0 0.657 E -76.3 136.0
af-a0a0g2jq47-f1 1 A0A0G2JQ47 81.85 9e-164 ILE A:66 A:66 115.0 0.657 E -72.2 135.8
af-q14952-f1 1 Q14952 81.14 3e-162 ILE A:73 A:73 123.0 0.703 E -80.5 133.3
af-q14953-f1 1 Q14953 81.49 5e-162 ILE A:73 A:73 113.0 0.646 E -86.7 129.8
af-a0a0g2jlq3-f1 1 A0A0G2JLQ3 81.49 2e-161 ILE A:73 A:73 114.0 0.651 E -86.6 130.3
af-a0a1w2pqm1-f1 1 A0A1W2PQM1 81.14 2e-161 ILE A:73 A:73 116.0 0.663 E -78.4 131.8
af-a0a0g2jng1-f1 1 A0A0G2JNG1 80.43 5e-159 ILE A:73 A:73 113.0 0.646 E -88.2 129.7
af-a0a5f9zh88-f1 1 A0A5F9ZH88 83.42 2e-115 ILE A:50 A:50 124.0 0.709 E -74.7 135.3
af-a0a2r8ycy7-f1 1 A0A2R8YCY7 83.92 1e-114 ILE A:50 A:50 107.0 0.611 E -78.4 132.8
af-a0a5f9z9y6-f1 1 A0A5F9Z9Y6 83.42 9e-114 ILE A:50 A:50 113.0 0.646 E -79.0 131.2
af-a0a1w2pqf6-f1 1 A0A1W2PQF6 83.92 1e-113 THR A:50 A:50 83.0 0.593 E -72.7 133.2
af-a0a1w2prs3-f1 1 A0A1W2PRS3 82.41 6e-112 THR A:50 A:50 95.0 0.679 E -69.8 135.8
af-a0a376a8z9-f1 1 A0A376A8Z9 82.83 3e-111 ILE A:73 A:73 111.0 0.634 E -87.8 130.0