Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr19 55365366 . G A CCDS12906.1:NM_006737.3:c.520Ggg>Agg_NP_006728.2:p.174G>R Homo sapiens killer cell immunoglobulin like receptor, three Ig domains and long cytoplasmic tail 2 (KIR3DL2), transcript variant 1, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
5t6z 4 P43629 86.24 0.0 X-RAY
 2017-03-01 GLY D:153 G:153 50.0 0.667 T 85.8 15.5 50.0 0.667 0.0 HOH
 4.971
 N
 O
5t70 3 P43629 86.24 0.0 X-RAY
 2017-03-01 GLY C:153 G:153 56.0 0.747 T 75.2 13.6 56.0 0.747 0.0 HOH
 2.693
 N
 O
6v3j 4 P43629 86.24 0.0 X-RAY
 2020-05-20 GLY D:153 G:153 59.0 0.787 T 86.0 -0.6 59.0 0.787 0.0 HOH
 3.048
 O
 O
7k80 4 P43629 86.24 0.0 X-RAY
 2020-12-09 GLY G:153 G:153 47.0 0.627 T 91.0 10.9 47.0 0.627 0.0 HOH
 8.968
 O
 O
GLY H:153 H:153 42.0 0.56 T -127.7 23.5 NA NA NA
3vh8 4 P43629 86.24 0.0 X-RAY
 2011-10-26 GLY D:170 G:153 55.0 0.733 T 85.4 15.5 55.0 0.733 0.0 HOH
 7.681
 O
 O
GLY H:170 H:153 57.0 0.76 T 86.0 9.5 NA NA NA
5b39 4 P43629 85.91 0.0 X-RAY
 2016-03-30 GLY D:153 G:153 54.0 0.72 T 84.1 4.5 54.0 0.72 0.0
5b38 4 P43629 85.57 0.0 X-RAY
 2016-03-30 GLY D:153 G:153 64.0 0.853 T 86.9 -5.5 64.0 0.853 0.0
7k81 4 I6LEL9 85.12 1e-179 X-RAY
 2020-12-09 GLY D:148 G:153 54.0 0.72 T 72.5 15.5 54.0 0.72 0.0 HOH
 9.099
 O
 O
3wuw 4 P43629 85.66 1e-179 X-RAY
 2014-05-28 GLY D:162 G:153 52.0 0.693 T 85.4 15.0 52.0 0.693 0.0 HOH
 7.861
 C
 O
1b6u 1 P43628 80.87 5e-130 X-RAY
 1999-01-27 GLY A:58 A:58 53.0 0.707 T 71.3 3.0 53.0 0.707 0.0
1im9 4 P43626 82.67 1e-128 X-RAY
 2001-05-30 GLY D:59 D:58 55.0 0.733 S 52.3 33.6 55.0 0.733 0.0
6pag 4 P43628 84.65 1e-118 X-RAY
 2020-12-16 GLY D:58 D:58 60.0 0.8 T 86.1 10.7 60.0 0.8 0.0
4n8v 1 P43631 84.08 1e-116 X-RAY
 2014-02-05 GLY A:59 NA:NA DO NA DO DO DO NA NA NA
GLY B:59 NA:NA DO NA DO DO DO NA NA NA
1m4k 1 P43631 84.85 4e-116 X-RAY
 2003-04-15 GLY A:58 A:58 59.0 0.787 S 76.4 18.8 59.0 0.787 0.0
7duu 4 P43631 84.85 4e-116 X-RAY
 2022-02-02 GLY D:58 D:58 66.0 0.88 S 93.6 -32.4 66.0 0.88 0.0 HOH
 8.307
 O
 O
6pa1 4 P43627 83.66 1e-115 X-RAY
 2020-12-16 GLY D:58 NA:NA DO NA DO DO DO NA NA NA
GLY H:58 NA:NA DO NA DO DO DO NA NA NA
3h8n 1 P43632 84.62 1e-114 X-RAY
 2009-10-20 GLY A:53 A:58 52.0 0.693 T 107.2 -36.0 52.0 0.693 0.0
1nkr 1 P43626 82.59 1e-113 X-RAY
 1998-11-11 GLY A:59 A:58 49.0 0.653 T 94.7 -16.8 49.0 0.653 0.0 HOH
 6.699
 N
 O
1efx 4 P43627 83.76 1e-112 X-RAY
 2000-06-14 GLY D:58 D:58 77.0 1.0 T 66.1 12.1 77.0 1.0 0.0 HOH
 7.313
 N
 O
GLY E:58 E:58 68.0 0.907 T 66.5 -6.8 68.0 0.907 0.0 HOH
 5.505
 N
 O
2dl2 1 P43627 84.1 3e-112 X-RAY
 1999-03-30 GLY A:55 A:58 74.0 0.987 S 89.4 19.0 74.0 0.987 0.0
2dli 1 P43627 84.1 3e-112 X-RAY
 2000-01-13 GLY A:55 A:58 49.0 0.653 S 65.3 -93.3 49.0 0.653 0.0

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p43630-f1 1 P43630 100.0 0.0 GLY A:174 A:174 54.0 0.72 T 72.2 14.2
af-p43629-f1 1 P43629 85.59 0.0 GLY A:174 A:174 53.0 0.707 T 72.5 16.0
af-q14943-f1 1 Q14943 84.28 0.0 GLY A:174 A:174 54.0 0.72 T 71.4 16.9
af-a0a191urj7-f1 1 A0A191URJ7 89.61 0.0 GLY A:79 A:79 54.0 0.72 T 70.8 18.7
af-a0a0g2jnf4-f1 1 A0A0G2JNF4 85.58 0.0 GLY A:79 A:79 44.0 0.587 T 78.1 -0.4
af-p43626-f1 1 P43626 82.52 0.0 GLY A:79 A:79 53.0 0.707 T 70.5 19.2
af-p43628-f1 1 P43628 84.91 0.0 GLY A:79 A:79 61.0 0.813 T 77.1 -0.3
af-p43627-f1 1 P43627 82.21 0.0 GLY A:79 A:79 70.0 0.933 T 75.3 1.2
af-p43631-f1 1 P43631 83.99 1e-169 GLY A:79 A:79 33.0 0.44 T 93.3 -18.6
af-p43632-f1 1 P43632 83.27 9e-169 GLY A:79 A:79 54.0 0.72 T 70.0 20.8
af-q14954-f1 1 Q14954 81.85 6e-164 GLY A:79 A:79 55.0 0.733 T 71.6 20.4
af-a0a0g2jq47-f1 1 A0A0G2JQ47 81.85 9e-164 GLY A:72 A:72 54.0 0.72 T 70.4 18.2
af-q14952-f1 1 Q14952 81.14 3e-162 GLY A:79 A:79 56.0 0.747 T 73.8 19.9
af-q14953-f1 1 Q14953 81.49 5e-162 GLY A:79 A:79 55.0 0.733 T 73.2 21.6
af-a0a0g2jlq3-f1 1 A0A0G2JLQ3 81.49 2e-161 GLY A:79 A:79 54.0 0.72 T 72.8 19.9
af-a0a1w2pqm1-f1 1 A0A1W2PQM1 81.14 2e-161 GLY A:79 A:79 53.0 0.707 T 72.8 18.4
af-a0a0g2jng1-f1 1 A0A0G2JNG1 80.43 5e-159 GLY A:79 A:79 55.0 0.733 T 73.0 20.7
af-a0a5f9zh88-f1 1 A0A5F9ZH88 83.42 2e-115 GLY A:56 A:56 54.0 0.72 T 72.7 19.2
af-a0a2r8ycy7-f1 1 A0A2R8YCY7 83.92 1e-114 GLY A:56 A:56 43.0 0.573 T 81.0 3.8
af-a0a5f9z9y6-f1 1 A0A5F9Z9Y6 83.42 9e-114 GLY A:56 A:56 71.0 0.947 T 75.7 -1.2
af-a0a1w2pqf6-f1 1 A0A1W2PQF6 83.92 1e-113 GLY A:56 A:56 38.0 0.507 T 90.0 -18.6
af-a0a1w2prs3-f1 1 A0A1W2PRS3 82.41 6e-112 GLY A:56 A:56 53.0 0.707 T 76.0 -2.9
af-a0a376a8z9-f1 1 A0A376A8Z9 82.83 3e-111 GLY A:79 A:79 54.0 0.72 T 73.0 24.9