Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr19 55367179 . A C CCDS12906.1:NM_006737.3:c.761cAt>cCt_NP_006728.2:p.254H>P Homo sapiens killer cell immunoglobulin like receptor, three Ig domains and long cytoplasmic tail 2 (KIR3DL2), transcript variant 1, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
5t6z 4 P43629 86.24 0.0 X-RAY
 2017-03-01 HIS D:233 G:233 6.0 0.031 E -118.2 124.6 6.0 0.031 0.0 HOH
 2.645
 ND1
 O
5t70 3 P43629 86.24 0.0 X-RAY
 2017-03-01 HIS C:233 G:233 12.0 0.062 E -120.8 122.8 12.0 0.062 0.0 HOH
 4.589
 NE2
 O
6v3j 4 P43629 86.24 0.0 X-RAY
 2020-05-20 HIS D:233 G:233 9.0 0.046 E -115.4 121.5 9.0 0.046 0.0 HOH
 2.705
 ND1
 O
7k80 4 P43629 86.24 0.0 X-RAY
 2020-12-09 HIS G:233 G:233 10.0 0.051 E -122.8 126.8 10.0 0.051 0.0 HOH
 5.249
 CE1
 O
HIS H:233 H:233 4.0 0.021 E -118.9 118.8 NA NA NA
3vh8 4 P43629 86.24 0.0 X-RAY
 2011-10-26 HIS D:250 G:233 4.0 0.021 E -118.9 124.6 4.0 0.021 0.0 HOH
 2.735
 ND1
 O
HIS H:250 H:233 6.0 0.031 E -124.4 124.9 NA NA NA
5b39 4 P43629 85.91 0.0 X-RAY
 2016-03-30 HIS D:233 G:233 17.0 0.087 E -112.2 130.7 17.0 0.087 0.0 HOH
 5.121
 ND1
 O
5b38 4 P43629 85.57 0.0 X-RAY
 2016-03-30 HIS D:233 G:233 10.0 0.051 E -115.8 121.7 10.0 0.051 0.0 HOH
 4.944
 NE2
 O
7k81 4 I6LEL9 85.12 1e-179 X-RAY
 2020-12-09 HIS D:228 G:233 20.0 0.103 E -119.4 122.0 20.0 0.103 0.0 HOH
 3.972
 NE2
 O
3wuw 4 P43629 85.66 1e-179 X-RAY
 2014-05-28 HIS D:242 G:233 5.0 0.026 E -118.4 124.3 5.0 0.026 0.0 HOH
 4.234
 NE2
 O
1b6u 1 P43628 80.87 5e-130 X-RAY
 1999-01-27 HIS A:138 A:138 17.0 0.087 E -114.8 127.2 17.0 0.087 0.0
1im9 4 P43626 82.67 1e-128 X-RAY
 2001-05-30 HIS D:139 D:138 6.0 0.031 E -109.2 128.3 6.0 0.031 0.0 HOH
 4.797
 NE2
 O
6pag 4 P43628 84.65 1e-118 X-RAY
 2020-12-16 HIS D:138 D:138 10.0 0.051 E -147.9 169.0 10.0 0.051 0.0
4n8v 1 P43631 84.08 1e-116 X-RAY
 2014-02-05 HIS A:139 G:138 4.0 0.021 E -133.5 113.8 4.0 0.021 0.0 HOH
 6.789
 C
 O
HIS B:139 I:138 4.0 0.021 E -132.1 113.1 NA NA NA
1m4k 1 P43631 84.85 4e-116 X-RAY
 2003-04-15 HIS A:138 A:138 8.0 0.041 E -126.9 131.8 8.0 0.041 0.0 SO4
HOH
 8.223
2.913
 CE1
CE1
 O1
O
7duu 4 P43631 84.85 4e-116 X-RAY
 2022-02-02 HIS D:138 D:138 4.0 0.021 E -126.4 125.7 4.0 0.021 0.0 HOH
 7.234
 NE2
 O
6pa1 4 P43627 83.66 1e-115 X-RAY
 2020-12-16 HIS D:138 D:138 14.0 0.072 E -124.7 147.2 14.0 0.072 0.0
HIS H:138 H:138 19.0 0.097 E -124.8 148.1 NA NA NA
3h8n 1 P43632 84.62 1e-114 X-RAY
 2009-10-20 HIS A:133 A:138 11.0 0.056 E -133.3 127.7 11.0 0.056 0.0 HOH
 2.790
 CD2
 O
1nkr 1 P43626 82.59 1e-113 X-RAY
 1998-11-11 HIS A:139 A:138 1.0 0.005 E -125.9 129.6 1.0 0.005 0.0 HOH
 2.890
 ND1
 O
1efx 4 P43627 83.76 1e-112 X-RAY
 2000-06-14 HIS D:138 D:138 15.0 0.077 E -126.1 137.3 15.0 0.077 0.0 HOH
 2.957
 ND1
 O
HIS E:138 E:138 16.0 0.082 E -122.5 129.2 16.0 0.082 0.0 HOH
 5.545
 CE1
 O
2dl2 1 P43627 84.1 3e-112 X-RAY
 1999-03-30 HIS A:135 A:138 3.0 0.015 -147.1 150.8 3.0 0.015 0.0 HOH
 6.427
 CE1
 O
2dli 1 P43627 84.1 3e-112 X-RAY
 2000-01-13 HIS A:135 A:138 14.0 0.072 E -126.7 149.1 14.0 0.072 0.0 HOH
 3.002
 ND1
 O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p43630-f1 1 P43630 100.0 0.0 HIS A:254 A:254 2.0 0.01 E -121.5 126.0
af-p43629-f1 1 P43629 85.59 0.0 HIS A:254 A:254 11.0 0.056 E -124.6 127.6
af-q14943-f1 1 Q14943 84.28 0.0 HIS A:254 A:254 11.0 0.056 E -121.7 137.1
af-a0a191urj7-f1 1 A0A191URJ7 89.61 0.0 HIS A:159 A:159 6.0 0.031 E -124.4 124.8
af-a0a0g2jnf4-f1 1 A0A0G2JNF4 85.58 0.0 HIS A:159 A:159 10.0 0.051 E -125.9 122.5
af-p43626-f1 1 P43626 82.52 0.0 HIS A:159 A:159 6.0 0.031 E -124.0 123.7
af-p43628-f1 1 P43628 84.91 0.0 HIS A:159 A:159 5.0 0.026 E -126.3 124.2
af-p43627-f1 1 P43627 82.21 0.0 HIS A:159 A:159 10.0 0.051 E -124.4 123.0
af-p43631-f1 1 P43631 83.99 1e-169 HIS A:159 A:159 7.0 0.036 E -123.0 131.6
af-p43632-f1 1 P43632 83.27 9e-169 HIS A:159 A:159 4.0 0.021 E -125.0 122.2
af-q14954-f1 1 Q14954 81.85 6e-164 HIS A:159 A:159 8.0 0.041 E -122.1 130.9
af-a0a0g2jq47-f1 1 A0A0G2JQ47 81.85 9e-164 HIS A:152 A:152 3.0 0.015 E -125.7 123.4
af-q14952-f1 1 Q14952 81.14 3e-162 HIS A:159 A:159 8.0 0.041 E -123.9 130.5
af-q14953-f1 1 Q14953 81.49 5e-162 HIS A:159 A:159 7.0 0.036 E -121.8 131.6
af-a0a0g2jlq3-f1 1 A0A0G2JLQ3 81.49 2e-161 HIS A:159 A:159 3.0 0.015 E -122.4 131.6
af-a0a1w2pqm1-f1 1 A0A1W2PQM1 81.14 2e-161 HIS A:151 A:151 32.0 0.164 E -126.2 137.5
af-a0a0g2jng1-f1 1 A0A0G2JNG1 80.43 5e-159 HIS A:159 A:159 6.0 0.031 E -123.2 131.3
af-a0a5f9zh88-f1 1 A0A5F9ZH88 83.42 2e-115 HIS A:136 A:136 8.0 0.041 E -122.9 132.3
af-a0a2r8ycy7-f1 1 A0A2R8YCY7 83.92 1e-114 HIS A:136 A:136 10.0 0.051 E -123.1 128.1
af-a0a5f9z9y6-f1 1 A0A5F9Z9Y6 83.42 9e-114 HIS A:136 A:136 10.0 0.051 E -125.7 121.8
af-a0a1w2pqf6-f1 1 A0A1W2PQF6 83.92 1e-113 HIS A:135 A:135 7.0 0.036 E -122.5 134.2
af-a0a1w2prs3-f1 1 A0A1W2PRS3 82.41 6e-112 HIS A:136 A:136 6.0 0.031 E -116.3 131.3
af-a0a376a8z9-f1 1 A0A376A8Z9 82.83 3e-111 HIS A:159 A:159 9.0 0.046 E -121.7 132.0