Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr19 55367191 . A C CCDS12906.1:NM_006737.3:c.773gAa>gCa_NP_006728.2:p.258E>A Homo sapiens killer cell immunoglobulin like receptor, three Ig domains and long cytoplasmic tail 2 (KIR3DL2), transcript variant 1, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
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alphafold_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
5t6z 4 P43629 86.24 0.0 X-RAY
 2017-03-01 GLU D:237 G:237 110.0 0.579 T -42.7 137.3 110.0 0.579 0.0 HOH
 3.084
 O
 O
5t70 3 P43629 86.24 0.0 X-RAY
 2017-03-01 GLU C:237 G:237 114.0 0.6 S -52.2 117.9 114.0 0.6 0.0 HOH
 2.802
 O
 O
6v3j 4 P43629 86.24 0.0 X-RAY
 2020-05-20 GLU D:237 G:237 110.0 0.579 S -58.0 115.6 110.0 0.579 0.0 HOH
 2.834
 O
 O
7k80 4 P43629 86.24 0.0 X-RAY
 2020-12-09 GLU G:237 G:237 110.0 0.579 S -69.1 128.6 110.0 0.579 0.0 HOH
 3.618
 N
 O
GLU H:237 H:237 125.0 0.658 T -69.1 -26.3 NA NA NA
3vh8 4 P43629 86.24 0.0 X-RAY
 2011-10-26 GLU D:254 G:237 108.0 0.568 T -42.9 137.4 108.0 0.568 0.0 HOH
 2.654
 O
 O
GLU H:254 H:237 112.0 0.589 -40.8 125.6 NA NA NA
5b39 4 P43629 85.91 0.0 X-RAY
 2016-03-30 GLU D:237 G:237 119.0 0.626 -64.5 115.8 119.0 0.626 0.0 HOH
 5.187
 C
 O
5b38 4 P43629 85.57 0.0 X-RAY
 2016-03-30 GLU D:237 G:237 123.0 0.647 T -68.9 100.6 123.0 0.647 0.0 HOH
 3.738
 OE2
 O
7k81 4 I6LEL9 85.12 1e-179 X-RAY
 2020-12-09 GLU D:232 G:237 110.0 0.579 T -54.3 127.7 110.0 0.579 0.0 HOH
 3.289
 N
 O
3wuw 4 P43629 85.66 1e-179 X-RAY
 2014-05-28 GLU D:246 G:237 121.0 0.637 T -42.9 -21.6 121.0 0.637 0.0 HOH
 2.742
 OE2
 O
1b6u 1 P43628 80.87 5e-130 X-RAY
 1999-01-27 GLU A:142 A:142 105.0 0.553 T -15.2 101.1 105.0 0.553 0.0
1im9 4 P43626 82.67 1e-128 X-RAY
 2001-05-30 GLU D:143 D:142 121.0 0.637 T -43.2 114.7 121.0 0.637 0.0 HOH
 2.895
 O
 O
6pag 4 P43628 84.65 1e-118 X-RAY
 2020-12-16 GLU D:142 D:142 234.0 1.0 -86.8 360.0 234.0 1.0 0.0
4n8v 1 P43631 84.08 1e-116 X-RAY
 2014-02-05 GLU A:143 G:142 130.0 0.684 T -50.1 -48.3 130.0 0.684 0.0 HOH
 3.290
 CB
 O
GLU B:143 I:142 129.0 0.679 T -51.1 -48.4 NA NA NA
1m4k 1 P43631 84.85 4e-116 X-RAY
 2003-04-15 GLU A:142 A:142 103.0 0.542 T -52.6 135.3 103.0 0.542 0.0 EDO
HOH
 8.363
2.605
 O
O
 O2
O
7duu 4 P43631 84.85 4e-116 X-RAY
 2022-02-02 GLU D:142 D:142 112.0 0.589 -48.4 360.0 112.0 0.589 0.0 HOH
 8.114
 OE1
 O
6pa1 4 P43627 83.66 1e-115 X-RAY
 2020-12-16 GLU D:142 D:142 110.0 0.579 58.2 360.0 110.0 0.579 0.0
GLU H:142 H:142 170.0 0.895 S 72.0 32.0 NA NA NA
3h8n 1 P43632 84.62 1e-114 X-RAY
 2009-10-20 GLU A:137 A:142 104.0 0.547 T -45.4 130.3 104.0 0.547 0.0 HOH
 2.973
 O
 O
1nkr 1 P43626 82.59 1e-113 X-RAY
 1998-11-11 GLU A:143 A:142 115.0 0.605 T -53.5 133.1 115.0 0.605 0.0 HOH
 2.805
 O
 O
1efx 4 P43627 83.76 1e-112 X-RAY
 2000-06-14 GLU D:142 D:142 117.0 0.616 T 14.3 -110.4 117.0 0.616 0.0 HOH
 4.505
 CA
 O
GLU E:142 E:142 92.0 0.484 T 57.6 22.8 92.0 0.484 0.0 HOH
 7.245
 O
 O
2dl2 1 P43627 84.1 3e-112 X-RAY
 1999-03-30 GLU A:139 A:142 87.0 0.458 S -153.0 51.3 87.0 0.458 0.0 HOH
 5.675
 O
 O
2dli 1 P43627 84.1 3e-112 X-RAY
 2000-01-13 GLU A:139 A:142 96.0 0.505 S 50.9 103.8 96.0 0.505 0.0 HOH
 3.784
 O
 O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p43630-f1 1 P43630 100.0 0.0 GLU A:258 A:258 115.0 0.605 T -59.2 128.4
af-p43629-f1 1 P43629 85.59 0.0 GLU A:258 A:258 116.0 0.611 T -61.3 128.9
af-q14943-f1 1 Q14943 84.28 0.0 GLU A:258 A:258 116.0 0.611 T -61.8 129.5
af-a0a191urj7-f1 1 A0A191URJ7 89.61 0.0 GLU A:163 A:163 122.0 0.642 T -57.3 128.4
af-a0a0g2jnf4-f1 1 A0A0G2JNF4 85.58 0.0 GLU A:163 A:163 122.0 0.642 T -57.4 129.4
af-p43626-f1 1 P43626 82.52 0.0 GLU A:163 A:163 121.0 0.637 T -57.2 128.9
af-p43628-f1 1 P43628 84.91 0.0 GLU A:163 A:163 123.0 0.647 T -57.3 129.7
af-p43627-f1 1 P43627 82.21 0.0 GLU A:163 A:163 120.0 0.632 T -57.8 133.5
af-p43631-f1 1 P43631 83.99 1e-169 GLU A:163 A:163 121.0 0.637 T -56.8 129.3
af-p43632-f1 1 P43632 83.27 9e-169 GLU A:163 A:163 120.0 0.632 T -56.4 129.0
af-q14954-f1 1 Q14954 81.85 6e-164 GLU A:163 A:163 119.0 0.626 T -55.7 130.0
af-a0a0g2jq47-f1 1 A0A0G2JQ47 81.85 9e-164 GLU A:156 A:156 121.0 0.637 T -56.7 130.9
af-q14952-f1 1 Q14952 81.14 3e-162 GLU A:163 A:163 118.0 0.621 T -64.2 127.6
af-q14953-f1 1 Q14953 81.49 5e-162 GLU A:163 A:163 117.0 0.616 T -61.9 127.6
af-a0a0g2jlq3-f1 1 A0A0G2JLQ3 81.49 2e-161 GLU A:163 A:163 123.0 0.647 T -57.6 129.4
af-a0a1w2pqm1-f1 1 A0A1W2PQM1 81.14 2e-161 GLU A:155 A:155 201.0 1.0 T -60.5 104.0
af-a0a0g2jng1-f1 1 A0A0G2JNG1 80.43 5e-159 GLU A:163 A:163 123.0 0.647 T -57.5 128.7
af-a0a5f9zh88-f1 1 A0A5F9ZH88 83.42 2e-115 GLU A:140 A:140 126.0 0.663 T -59.0 129.8
af-a0a2r8ycy7-f1 1 A0A2R8YCY7 83.92 1e-114 GLU A:140 A:140 122.0 0.642 T -60.7 131.0
af-a0a5f9z9y6-f1 1 A0A5F9Z9Y6 83.42 9e-114 GLU A:140 A:140 118.0 0.621 T -61.7 131.3
af-a0a1w2pqf6-f1 1 A0A1W2PQF6 83.92 1e-113 GLU A:139 A:139 124.0 0.653 T -59.6 130.6
af-a0a1w2prs3-f1 1 A0A1W2PRS3 82.41 6e-112 GLU A:140 A:140 123.0 0.647 T -59.0 127.8
af-a0a376a8z9-f1 1 A0A376A8Z9 82.83 3e-111 GLU A:163 A:163 117.0 0.616 T -61.4 129.7