Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr19 621260 . A C CCDS12036.1:NM_005035.3:c.2438tTc>tGc_NP_005026.3:p.813F>C Homo sapiens RNA polymerase mitochondrial (POLRMT), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
7a8p 1 O00411 99.91 0.0 EM
 2020-12-30 PHE A:726 A:813 30.0 0.143 G -91.0 21.0 30.0 0.143 0.0 R4Q
 3.199
 C
 O19
6erp 4 O00411 99.91 0.0 X-RAY
 2017-11-15 PHE G:711 A:813 1.0 0.005 S -117.2 109.6 1.0 0.005 0.0
PHE H:711 B:813 1.0 0.005 S -116.7 111.2 NA NA NA
6erq 4 O00411 99.91 0.0 X-RAY
 2017-11-15 PHE G:711 A:813 0.0 0.0 S -116.4 111.8 0.0 0.0 0.0
PHE H:711 B:813 1.0 0.005 S -116.8 112.6 NA NA NA
3spa 1 O00411 99.91 0.0 X-RAY
 2011-09-28 PHE A:717 A:813 0.0 0.0 S -118.2 112.6 0.0 0.0 0.0 GOL
HOH
 6.427
7.431
 CE1
O
 O2
O
4boc 1 O00411 100.0 0.0 X-RAY
 2013-09-25 PHE A:671 A:813 2.0 0.01 S -115.3 110.4 2.0 0.01 0.0 DC
DG
DC
HOH
 9.023
7.453
8.895
3.631
 N
N
N
CA
 C2'
C4'
OP1
O
5ola 2 O00411 99.91 0.0 X-RAY
 2017-10-18 PHE E:671 E:813 1.0 0.005 S -118.3 109.4 1.0 0.005 0.0 DC
DG
DC
 8.903
7.565
9.867
 N
N
N
 O3'
C5'
OP1
PHE I:671 F:813 1.0 0.005 S -119.1 110.6 NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-o00411-f1 1 O00411 100.0 0.0 PHE A:813 A:813 1.0 0.005 S -129.8 105.0