Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr19 622709 . A C CCDS12036.1:NM_005035.3:c.1499cTg>cGg_NP_005026.3:p.500L>R Homo sapiens RNA polymerase mitochondrial (POLRMT), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
7a8p 1 O00411 99.91 0.0 EM
 2020-12-30 LEU A:413 A:500 14.0 0.082 H -65.1 -41.9 14.0 0.082 0.0
6erp 4 O00411 99.91 0.0 X-RAY
 2017-11-15 LEU G:398 A:500 5.0 0.029 H -61.3 -41.3 5.0 0.029 0.0 DG
 9.671
 N
 N1
LEU H:398 B:500 3.0 0.018 H -60.3 -41.7 NA NA NA
6erq 4 O00411 99.91 0.0 X-RAY
 2017-11-15 LEU G:398 A:500 6.0 0.035 H -58.7 -44.0 6.0 0.035 0.0 DG
DT
 9.808
9.513
 N
N
 N1
OP1
LEU H:398 B:500 5.0 0.029 H -58.0 -44.0 NA NA NA
3spa 1 O00411 99.91 0.0 X-RAY
 2011-09-28 LEU A:404 A:500 10.0 0.059 H -67.5 -37.5 10.0 0.059 0.0
4boc 1 O00411 100.0 0.0 X-RAY
 2013-09-25 LEU A:358 A:500 3.0 0.018 H -59.3 -42.4 3.0 0.018 0.0 G
DC
HOH
 8.421
9.484
4.874
 N
N
CD1
 N7
N4
O
5ola 2 O00411 99.91 0.0 X-RAY
 2017-10-18 LEU E:358 E:500 4.0 0.024 H -63.2 -41.0 4.0 0.024 0.0 G
 8.248
 N
 OP1
LEU I:358 F:500 4.0 0.024 H -64.5 -42.6 NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-o00411-f1 1 O00411 100.0 0.0 LEU A:500 A:500 2.0 0.012 H -59.2 -40.0