Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr19 11436187 . T A CCDS12257.1:NM_004283.3:c.547Atc>Ttc_NP_004274.1:p.183I>F Homo sapiens RAB3D, member RAS oncogene family (RAB3D), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
2gf9 1 O95716 100.0 6e-127 X-RAY
 2006-05-02 ILE A:183 A:183 3.0 0.017 H -63.9 -47.0 3.0 0.017 0.0 UNX
HOH
 5.845
2.933
 C
O
 UNK
O
1zbd 1 P63012 81.54 3e-118 X-RAY
 1999-04-02 ILE A:169 A:183 11.0 0.063 H -64.1 -41.7 1.0 0.006 0.057 B:P47709:0.057
 HOH
 6.977
 CG2
 O
4rkf 1 P25228 81.48 2e-115 X-RAY
 2014-12-10 ILE A:184 A:182 8.0 0.046 H -63.3 -50.9 8.0 0.046 0.0 HOH
 4.876
 N
 O
ILE B:184 B:182 3.0 0.017 H -65.9 -46.1 NA NA NA
3rab 1 P63012 89.35 2e-114 X-RAY
 1999-04-16 ILE A:166 A:183 12.0 0.069 H -72.8 -45.4 12.0 0.069 0.0 HOH
 3.972
 CG2
 O
3dz8 1 P20337 86.13 1e-113 X-RAY
 2008-08-12 ILE A:184 A:183 0.0 0.0 H -59.8 -53.4 0.0 0.0 0.0 HOH
 7.750
 N
 O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-o95716-f1 1 O95716 100.0 4e-166 ILE A:183 A:183 4.0 0.023 H -64.5 -43.9