Variant
Genome | Chromosome | Position | VCF ID | Ref | Alt | mRNA Change | mRNA Info | GRCh37 | chr19 | 11446143 | . | C | A | CCDS12257.1:NM_004283.3:c.452cGg>cTg_NP_004274.1:p.151R>L | Homo sapiens RAB3D, member RAS oncogene family (RAB3D), mRNA. |
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PDB
Entity | Residue | Monomer | BioUnit | Ligand | View | ||||||||||||||||||
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PDB | Entity | Uniprot | Identity | Evalue | ExpMethod | Date | Name | Label | Auth | ASA | rASA | SS | φ | ψ | ASA | rASA | ΔASA | Interaction | Name | Distance | Atom(p) | Atom(l) | |
2gf9 | 1 | O95716 | 100.0 | 6e-127 |
X-RAY |
2006-05-02 | ARG | A:151 | A:151 | 116.0 | 0.516 | H | -63.2 | -41.9 | 116.0 | 0.516 | 0.0 |
HOH |
2.917 |
O |
O |
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1zbd | 1 | P63012 | 81.54 | 3e-118 |
X-RAY |
1999-04-02 | ARG | A:137 | A:151 | 128.0 | 0.569 | H | -52.8 | -48.4 | 128.0 | 0.569 | 0.0 |
HOH |
2.926 |
NH2 |
O |
||
4rkf | 1 | P25228 | 81.48 | 2e-115 |
X-RAY |
2014-12-10 | ARG | A:152 | A:150 | 90.0 | 0.4 | H | -63.4 | -40.0 | 90.0 | 0.4 | 0.0 |
HOH |
2.800 |
NH1 |
O |
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ARG | B:152 | B:150 | 95.0 | 0.422 | H | -58.6 | -41.2 | NA | NA | NA | |||||||||||||
3rab | 1 | P63012 | 89.35 | 2e-114 |
X-RAY |
1999-04-16 | ARG | A:134 | A:151 | 115.0 | 0.511 | H | -60.5 | -43.1 | 115.0 | 0.511 | 0.0 |
HOH |
2.909 |
NH1 |
O |
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3dz8 | 1 | P20337 | 86.13 | 1e-113 |
X-RAY |
2008-08-12 | GLN | A:152 | A:151 | 107.0 | 0.594 | H | -58.3 | -40.7 | 107.0 | 0.594 | 0.0 |
HOH |
6.369 |
N |
O |
AlphaFold DB
Entity | Residue | Monomer | View | ||||||||||
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ID | Entity | Uniprot | Identity | Evalue | Name | Label | Auth | ASA | rASA | SS | φ | ψ | |
af-o95716-f1 | 1 | O95716 | 100.0 | 4e-166 | ARG | A:151 | A:151 | 154.0 | 0.684 | H | -63.2 | -48.3 |