Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr19 11446167 . C A CCDS12257.1:NM_004283.3:c.428cGt>cTt_NP_004274.1:p.143R>L Homo sapiens RAB3D, member RAS oncogene family (RAB3D), mRNA.
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
2gf9 1 O95716 100.0 6e-127 X-RAY
 2006-05-02 ARG A:143 A:143 65.0 0.289 -55.8 131.3 65.0 0.289 0.0 HOH
 2.862
 O
 O
1zbd 1 P63012 81.54 3e-118 X-RAY
 1999-04-02 ARG A:129 A:143 56.0 0.249 -64.7 126.8 56.0 0.249 0.0 HOH
 7.376
 NH1
 O
4rkf 1 P25228 81.48 2e-115 X-RAY
 2014-12-10 ARG A:144 A:142 53.0 0.236 -58.6 133.8 53.0 0.236 0.0 GNP
HOH
 9.791
2.573
 N
O
 N2
O
ARG B:144 B:142 56.0 0.249 -62.0 133.6 NA NA NA
3rab 1 P63012 89.35 2e-114 X-RAY
 1999-04-16 ARG A:126 A:143 54.0 0.24 -60.3 135.1 54.0 0.24 0.0 HOH
 3.476
 NE
 O
3dz8 1 P20337 86.13 1e-113 X-RAY
 2008-08-12 ARG A:144 A:143 53.0 0.236 -60.7 137.1 53.0 0.236 0.0 HOH
 3.428
 NH1
 O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-o95716-f1 1 O95716 100.0 4e-166 ARG A:143 A:143 53.0 0.236 -60.2 125.8