Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr19 11446360 . A C CCDS12257.1:NM_004283.3:c.328Ttt>Gtt_NP_004274.1:p.110F>V Homo sapiens RAB3D, member RAS oncogene family (RAB3D), mRNA.
pdb_id: 
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label_comp_id: 
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alphafold_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
2gf9 1 O95716 100.0 6e-127 X-RAY
 2006-05-02 PHE A:110 A:110 22.0 0.105 H -77.2 -40.8 22.0 0.105 0.0 HOH
 2.864
 O
 O
1zbd 1 P63012 81.54 3e-118 X-RAY
 1999-04-02 PHE A:96 A:110 15.0 0.071 H -75.3 -31.3 15.0 0.071 0.0 HOH
 3.644
 O
 O
4rkf 1 P25228 81.48 2e-115 X-RAY
 2014-12-10 PHE A:111 A:109 20.0 0.095 H -72.7 -42.6 20.0 0.095 0.0 1PE
HOH
 8.798
2.953
 O
O
 C14
O
PHE B:111 B:109 18.0 0.086 H -71.4 -41.3 NA NA NA
3rab 1 P63012 89.35 2e-114 X-RAY
 1999-04-16 PHE A:93 A:110 13.0 0.062 H -74.7 -43.8 13.0 0.062 0.0 HOH
 3.317
 O
 O
3dz8 1 P20337 86.13 1e-113 X-RAY
 2008-08-12 PHE A:111 A:110 25.0 0.119 H -73.2 -36.2 25.0 0.119 0.0 HOH
 4.812
 N
 O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-o95716-f1 1 O95716 100.0 4e-166 PHE A:110 A:110 24.0 0.114 H -72.0 -44.2