Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr19 11446411 . G A CCDS12257.1:NM_004283.3:c.277Cgg>Tgg_NP_004274.1:p.93R>W Homo sapiens RAB3D, member RAS oncogene family (RAB3D), mRNA.
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alphafold_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
2gf9 1 O95716 100.0 6e-127 X-RAY
 2006-05-02 ARG A:93 A:93 204.0 0.907 T -61.3 125.5 204.0 0.907 0.0 HOH
 3.330
 N
 O
1zbd 1 P63012 81.54 3e-118 X-RAY
 1999-04-02 ARG A:79 A:93 139.0 0.618 G -53.2 -14.8 88.0 0.391 0.227 B:P47709:0.227
 HOH
 3.334
 O
 O
4rkf 1 P25228 81.48 2e-115 X-RAY
 2014-12-10 ARG A:94 A:92 203.0 0.902 T -59.6 122.8 203.0 0.902 0.0 HOH
 3.168
 N
 O
ARG B:94 B:92 205.0 0.911 T -52.6 130.8 NA NA NA
3rab 1 P63012 89.35 2e-114 X-RAY
 1999-04-16 ARG A:76 A:93 151.0 0.671 T -62.9 133.4 151.0 0.671 0.0 HOH
 3.084
 N
 O
3dz8 1 P20337 86.13 1e-113 X-RAY
 2008-08-12 ARG A:94 A:93 120.0 0.533 T -51.3 121.2 120.0 0.533 0.0 HOH
 3.582
 CB
 O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-o95716-f1 1 O95716 100.0 4e-166 ARG A:93 A:93 182.0 0.809 T -61.4 124.8