Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr19 11447879 . C A CCDS12257.1:NM_004283.3:c.197cGc>cTc_NP_004274.1:p.66R>L Homo sapiens RAB3D, member RAS oncogene family (RAB3D), mRNA.
pdb_id: 
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label_comp_id: 
auth_asym_id: 
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alphafold_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
2gf9 1 O95716 100.0 6e-127 X-RAY
 2006-05-02 ARG A:66 A:66 65.0 0.289 E -148.2 146.8 65.0 0.289 0.0 UNX
HOH
 4.996
3.573
 O
CA
 UNK
O
1zbd 1 P63012 81.54 3e-118 X-RAY
 1999-04-02 ARG A:52 A:66 69.0 0.307 E -144.9 146.3 69.0 0.307 0.0 HOH
 3.787
 NH2
 O
4rkf 1 P25228 81.48 2e-115 X-RAY
 2014-12-10 ARG A:67 A:65 79.0 0.351 E -144.3 126.5 79.0 0.351 0.0 HOH
 3.663
 C
 O
ARG B:67 B:65 101.0 0.449 E -144.1 121.5 NA NA NA
3rab 1 P63012 89.35 2e-114 X-RAY
 1999-04-16 ARG A:49 A:66 70.0 0.311 E -130.6 127.8 70.0 0.311 0.0 HOH
 2.719
 NH1
 O
3dz8 1 P20337 86.13 1e-113 X-RAY
 2008-08-12 ARG A:67 A:66 49.0 0.218 E -110.8 121.6 49.0 0.218 0.0 UNX
UNX
UNX
HOH
 9.150
3.612
3.833
3.809
 CD
NH2
NE
NH2
 UNK
UNK
UNK
O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-o95716-f1 1 O95716 100.0 4e-166 ARG A:66 A:66 49.0 0.218 E -142.5 127.9