Variant
| Genome | Chromosome | Position | VCF ID | Ref | Alt | mRNA Change | mRNA Info | GRCh37 | chr19 | 11447886 | . | C | A | CCDS12257.1:NM_004283.3:c.190Gtc>Ttc_NP_004274.1:p.64V>F | Homo sapiens RAB3D, member RAS oncogene family (RAB3D), mRNA. |
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PDB
| Entity | Residue | Monomer | BioUnit | Ligand | View | ||||||||||||||||||
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| PDB | Entity | Uniprot | Identity | Evalue | ExpMethod | Date | Name | Label | Auth | ASA | rASA | SS | φ | ψ | ASA | rASA | ΔASA | Interaction | Name | Distance | Atom(p) | Atom(l) | |
| 2gf9 | 1 | O95716 | 100.0 | 6e-127 |
X-RAY |
2006-05-02 | VAL | A:64 | A:64 | 7.0 | 0.045 | E | -123.7 | 141.9 | 7.0 | 0.045 | 0.0 |
UNX HOH |
8.301 3.384 |
CG2 CA |
UNK O |
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| 1zbd | 1 | P63012 | 81.54 | 3e-118 |
X-RAY |
1999-04-02 | ILE | A:50 | A:64 | 27.0 | 0.154 | E | -132.4 | 163.7 | 27.0 | 0.154 | 0.0 |
HOH |
4.242 |
CG2 |
O |
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| 4rkf | 1 | P25228 | 81.48 | 2e-115 |
X-RAY |
2014-12-10 | VAL | A:65 | A:63 | 29.0 | 0.187 | E | -119.0 | 159.8 | 29.0 | 0.187 | 0.0 |
HOH |
3.491 |
CA |
O |
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| VAL | B:65 | B:63 | 33.0 | 0.213 | E | -129.1 | 162.7 | NA | NA | NA | |||||||||||||
| 3rab | 1 | P63012 | 89.35 | 2e-114 |
X-RAY |
1999-04-16 | ILE | A:47 | A:64 | 23.0 | 0.131 | E | -115.3 | 164.1 | 23.0 | 0.131 | 0.0 |
HOH |
3.684 |
CB |
O |
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| 3dz8 | 1 | P20337 | 86.13 | 1e-113 |
X-RAY |
2008-08-12 | VAL | A:65 | A:64 | 0.0 | 0.0 | E | -120.6 | 129.5 | 0.0 | 0.0 | 0.0 |
UNX UNX HOH |
7.602 8.015 3.647 |
CG2 CG1 CA |
UNK UNK O |
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AlphaFold DB
| Entity | Residue | Monomer | View | ||||||||||
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| ID | Entity | Uniprot | Identity | Evalue | Name | Label | Auth | ASA | rASA | SS | φ | ψ | |
| af-o95716-f1 | 1 | O95716 | 100.0 | 4e-166 | VAL | A:64 | A:64 | 15.0 | 0.097 | E | -123.5 | 160.5 | |