Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr19 11447948 . G A CCDS12257.1:NM_004283.3:c.128gCg>gTg_NP_004274.1:p.43A>V Homo sapiens RAB3D, member RAS oncogene family (RAB3D), mRNA.
pdb_id: 
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label_comp_id: 
auth_asym_id: 
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alphafold_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
2gf9 1 O95716 100.0 6e-127 X-RAY
 2006-05-02 ALA A:43 A:43 20.0 0.174 H -78.1 -43.9 20.0 0.174 0.0 HOH
 3.031
 O
 O
1zbd 1 P63012 81.54 3e-118 X-RAY
 1999-04-02 ALA A:29 A:43 29.0 0.252 H -76.4 -70.8 29.0 0.252 0.0 HOH
 6.405
 O
 O
4rkf 1 P25228 81.48 2e-115 X-RAY
 2014-12-10 ALA A:44 A:42 30.0 0.261 H -81.9 -40.1 30.0 0.261 0.0 HOH
 2.668
 O
 O
ALA B:44 B:42 22.0 0.191 H -77.5 -41.1 NA NA NA
3rab 1 P63012 89.35 2e-114 X-RAY
 1999-04-16 ALA A:26 A:43 25.0 0.217 H -80.8 -37.5 25.0 0.217 0.0 HOH
 2.540
 O
 O
3dz8 1 P20337 86.13 1e-113 X-RAY
 2008-08-12 ALA A:44 A:43 2.0 0.017 H -57.7 -51.8 0.0 0.0 0.017 A:P20337:0.017
 UNX
UNX
UNX
UNX
HOH
 3.216
7.978
9.436
9.238
6.933
 O
O
O
O
O
 UNK
UNK
UNK
UNK
O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-o95716-f1 1 O95716 100.0 4e-166 ALA A:43 A:43 20.0 0.174 H -79.4 -45.2