Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr19 12814590 . C A CCDS45991.1:NM_001136196.1:c.2048aGc>aTc_NP_001129668.1:p.683S>I Homo sapiens transportin 2 (TNPO2), transcript variant 1, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
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label_comp_id: 
auth_asym_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
2qmr 1 Q92973 84.39 0.0 X-RAY
 2007-10-30 SER A:686 A:686 5.0 0.043 H -63.9 -37.2 5.0 0.043 0.0
SER B:686 B:686 0.0 0.0 H -67.8 -32.6 NA NA NA
SER C:686 C:686 0.0 0.0 H -65.7 -35.1 NA NA NA
SER D:686 D:686 6.0 0.052 H -63.5 -36.7 NA NA NA
2z5j 1 Q92973 84.39 0.0 X-RAY
 2007-10-23 SER A:686 A:686 7.0 0.061 H -94.7 49.8 7.0 0.061 0.0
2z5k 1 Q92973 84.39 0.0 X-RAY
 2007-10-23 SER A:686 A:686 4.0 0.035 H -70.4 -35.7 4.0 0.035 0.0 HOH
 7.970
 OG
 O
2z5m 1 Q92973 84.39 0.0 X-RAY
 2007-10-23 SER A:686 A:686 6.0 0.052 H -65.6 -34.2 6.0 0.052 0.0
2z5n 1 Q92973 84.39 0.0 X-RAY
 2007-10-23 SER A:686 A:686 5.0 0.043 H -50.9 -39.9 5.0 0.043 0.0
2z5o 1 Q92973 84.39 0.0 X-RAY
 2007-10-23 SER A:686 A:686 4.0 0.035 H -67.3 -29.3 4.0 0.035 0.0
4fq3 1 Q92973 84.39 0.0 X-RAY
 2013-08-21 SER A:686 A:686 4.0 0.035 H -56.8 -37.4 4.0 0.035 0.0
1qbk 1 Q92973 84.28 0.0 X-RAY
 1999-06-01 SER A:686 B:686 0.0 0.0 H -75.7 -35.2 0.0 0.0 0.0
5yvg 1 Q92973 83.26 0.0 X-RAY
 2018-05-16 SER A:664 A:686 4.0 0.035 H -67.2 -36.8 1.0 0.009 0.026 C:P35637:0.026
SER B:664 B:686 2.0 0.017 H -64.9 -36.9 NA NA NA
5yvh 1 Q92973 83.26 0.0 X-RAY
 2018-05-16 SER A:664 A:686 7.0 0.061 H -70.4 -34.0 5.0 0.043 0.018 B:P35637:0.017
5yvi 1 Q92973 83.26 0.0 X-RAY
 2018-05-16 SER A:664 A:686 13.0 0.113 H -71.9 -35.7 13.0 0.113 0.0
7cyl 1 Q92973 83.26 0.0 X-RAY
 2021-02-24 SER A:664 A:686 2.0 0.017 H -70.7 -34.6 2.0 0.017 0.0
2h4m 1 Q92973 83.04 0.0 X-RAY
 2006-10-24 SER A:661 A:686 3.0 0.026 H -64.1 -54.2 3.0 0.026 0.0
SER B:661 B:686 4.0 0.035 H -74.1 -43.0 2.0 0.017 0.018 D:P09651:0.017
5tqc 1 Q92973 82.92 0.0 X-RAY
 2017-02-15 SER A:662 A:686 3.0 0.026 H -73.3 -13.9 3.0 0.026 0.0
2ot8 1 Q92973 82.25 0.0 X-RAY
 2007-04-10 SER A:648 A:686 5.0 0.043 H -70.2 -37.7 3.0 0.026 0.017 C:P52272:0.017
SER B:648 B:686 5.0 0.043 H -79.9 -47.4 NA NA NA
4fdd 1 Q92973 82.25 0.0 X-RAY
 2012-07-18 SER A:648 A:686 12.0 0.104 H -71.1 -34.4 12.0 0.104 0.0 HOH
 3.111
 OG
 O
4jlq 1 Q92973 81.81 0.0 X-RAY
 2013-04-03 SER A:650 A:686 2.0 0.017 H -69.1 -16.5 2.0 0.017 0.0
4oo6 1 Q92973 81.81 0.0 X-RAY
 2014-02-12 SER A:650 A:686 6.0 0.052 H -59.7 -37.7 6.0 0.052 0.0
5j3v 1 Q92973 81.81 0.0 X-RAY
 2016-09-21 SER A:650 A:686 2.0 0.017 H -75.2 -30.9 2.0 0.017 0.0
SER C:650 B:686 3.0 0.026 H -70.7 -31.7 NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-o14787-f1 1 O14787 100.0 0.0 SER A:683 A:683 0.0 0.0 H -65.1 -34.9
af-q92973-f1 1 Q92973 84.39 0.0 SER A:694 A:694 0.0 0.0 H -64.3 -37.4