Variant
Genome | Chromosome | Position | VCF ID | Ref | Alt | mRNA Change | mRNA Info | GRCh37 | chr19 | 12817035 | . | G | A | CCDS45991.1:NM_001136196.1:c.1643tCt>tTt_NP_001129668.1:p.548S>F | Homo sapiens transportin 2 (TNPO2), transcript variant 1, mRNA. |
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PDB
Entity | Residue | Monomer | BioUnit | Ligand | View | ||||||||||||||||||
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PDB | Entity | Uniprot | Identity | Evalue | ExpMethod | Date | Name | Label | Auth | ASA | rASA | SS | φ | ψ | ASA | rASA | ΔASA | Interaction | Name | Distance | Atom(p) | Atom(l) | |
2qmr | 1 | Q92973 | 84.39 | 0.0 |
X-RAY |
2007-10-30 | SER | A:551 | A:551 | 18.0 | 0.157 | H | -84.8 | -39.2 | 18.0 | 0.157 | 0.0 | ||||||
SER | B:551 | B:551 | 16.0 | 0.139 | H | -78.7 | -27.4 | NA | NA | NA | |||||||||||||
SER | C:551 | C:551 | 17.0 | 0.148 | H | -79.4 | -28.2 | NA | NA | NA | |||||||||||||
SER | D:551 | D:551 | 17.0 | 0.148 | H | -85.3 | -39.4 | NA | NA | NA | |||||||||||||
2z5j | 1 | Q92973 | 84.39 | 0.0 |
X-RAY |
2007-10-23 | SER | A:551 | A:551 | 12.0 | 0.104 | H | -133.3 | -4.6 | 12.0 | 0.104 | 0.0 | ||||||
2z5k | 1 | Q92973 | 84.39 | 0.0 |
X-RAY |
2007-10-23 | SER | A:551 | A:551 | 15.0 | 0.13 | H | -82.9 | -40.3 | 15.0 | 0.13 | 0.0 |
PO4 HOH |
7.146 9.426 |
O OG |
O4 O |
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2z5m | 1 | Q92973 | 84.39 | 0.0 |
X-RAY |
2007-10-23 | SER | A:551 | A:551 | 18.0 | 0.157 | H | -80.5 | -49.0 | 18.0 | 0.157 | 0.0 | ||||||
2z5n | 1 | Q92973 | 84.39 | 0.0 |
X-RAY |
2007-10-23 | SER | A:551 | A:551 | 16.0 | 0.139 | H | -83.6 | -42.5 | 16.0 | 0.139 | 0.0 | ||||||
2z5o | 1 | Q92973 | 84.39 | 0.0 |
X-RAY |
2007-10-23 | SER | A:551 | A:551 | 13.0 | 0.113 | H | -95.8 | -57.8 | 13.0 | 0.113 | 0.0 | ||||||
4fq3 | 1 | Q92973 | 84.39 | 0.0 |
X-RAY |
2013-08-21 | SER | A:551 | A:551 | 14.0 | 0.122 | H | -77.4 | -46.2 | 14.0 | 0.122 | 0.0 | ||||||
1qbk | 1 | Q92973 | 84.28 | 0.0 |
X-RAY |
1999-06-01 | SER | A:551 | B:551 | 10.0 | 0.087 | H | -77.9 | -54.4 | 10.0 | 0.087 | 0.0 | ||||||
5yvg | 1 | Q92973 | 83.26 | 0.0 |
X-RAY |
2018-05-16 | SER | A:529 | A:551 | 18.0 | 0.157 | H | -87.9 | -41.4 | 18.0 | 0.157 | 0.0 | ||||||
SER | B:529 | B:551 | 33.0 | 0.287 | H | -71.0 | -80.1 | NA | NA | NA | |||||||||||||
5yvh | 1 | Q92973 | 83.26 | 0.0 |
X-RAY |
2018-05-16 | SER | A:529 | A:551 | 18.0 | 0.157 | H | -67.9 | -45.6 | 18.0 | 0.157 | 0.0 | ||||||
5yvi | 1 | Q92973 | 83.26 | 0.0 |
X-RAY |
2018-05-16 | SER | A:529 | A:551 | 15.0 | 0.13 | H | -84.6 | -41.6 | 15.0 | 0.13 | 0.0 | ||||||
7cyl | 1 | Q92973 | 83.26 | 0.0 |
X-RAY |
2021-02-24 | SER | A:529 | A:551 | 21.0 | 0.183 | H | -67.9 | -45.8 | 21.0 | 0.183 | 0.0 | ||||||
2h4m | 1 | Q92973 | 83.04 | 0.0 |
X-RAY |
2006-10-24 | SER | A:526 | A:551 | 14.0 | 0.122 | H | -96.1 | 12.3 | 14.0 | 0.122 | 0.0 | ||||||
SER | B:526 | B:551 | 19.0 | 0.165 | H | -78.0 | -18.3 | 19.0 | 0.165 | 0.0 | |||||||||||||
5tqc | 1 | Q92973 | 82.92 | 0.0 |
X-RAY |
2017-02-15 | SER | A:527 | A:551 | 12.0 | 0.104 | H | -105.7 | -45.4 | 12.0 | 0.104 | 0.0 | ||||||
2ot8 | 1 | Q92973 | 82.25 | 0.0 |
X-RAY |
2007-04-10 | SER | A:513 | A:551 | 15.0 | 0.13 | H | -83.2 | -6.1 | 15.0 | 0.13 | 0.0 | ||||||
SER | B:513 | B:551 | 21.0 | 0.183 | H | -70.5 | -32.8 | NA | NA | NA | |||||||||||||
4fdd | 1 | Q92973 | 82.25 | 0.0 |
X-RAY |
2012-07-18 | SER | A:513 | A:551 | 16.0 | 0.139 | H | -67.4 | -45.8 | 16.0 | 0.139 | 0.0 |
HOH |
2.525 |
OG |
O |
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4jlq | 1 | Q92973 | 81.81 | 0.0 |
X-RAY |
2013-04-03 | SER | A:515 | A:551 | 14.0 | 0.122 | H | -85.3 | -30.6 | 14.0 | 0.122 | 0.0 | ||||||
4oo6 | 1 | Q92973 | 81.81 | 0.0 |
X-RAY |
2014-02-12 | SER | A:515 | A:551 | 16.0 | 0.139 | H | -85.3 | -37.7 | 16.0 | 0.139 | 0.0 | ||||||
5j3v | 1 | Q92973 | 81.81 | 0.0 |
X-RAY |
2016-09-21 | SER | A:515 | A:551 | 15.0 | 0.13 | H | -86.4 | -51.3 | 15.0 | 0.13 | 0.0 | ||||||
SER | C:515 | B:551 | 14.0 | 0.122 | H | -100.4 | -46.6 | NA | NA | NA |
AlphaFold DB
Entity | Residue | Monomer | View | ||||||||||
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ID | Entity | Uniprot | Identity | Evalue | Name | Label | Auth | ASA | rASA | SS | φ | ψ | |
af-o14787-f1 | 1 | O14787 | 100.0 | 0.0 | SER | A:548 | A:548 | 13.0 | 0.113 | H | -77.2 | -39.1 | |
af-q92973-f1 | 1 | Q92973 | 84.39 | 0.0 | SER | A:559 | A:559 | 14.0 | 0.122 | H | -67.1 | -44.5 |