Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr19 12822117 . C A CCDS45991.1:NM_001136196.1:c.1110tgG>tgT_NP_001129668.1:p.370W>C Homo sapiens transportin 2 (TNPO2), transcript variant 1, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
2qmr 1 Q92973 84.39 0.0 X-RAY
 2007-10-30 TRP A:373 A:373 94.0 0.369 S -142.3 128.8 94.0 0.369 0.0
TRP B:373 B:373 120.0 0.471 -64.2 132.1 NA NA NA
TRP C:373 C:373 116.0 0.455 S -66.6 132.6 NA NA NA
TRP D:373 D:373 95.0 0.373 S -141.9 127.4 NA NA NA
2z5j 1 Q92973 84.39 0.0 X-RAY
 2007-10-23 TRP A:373 A:373 117.0 0.459 -162.4 101.0 117.0 0.459 0.0
2z5k 1 Q92973 84.39 0.0 X-RAY
 2007-10-23 TRP A:373 A:373 96.0 0.376 -133.8 119.7 48.0 0.188 0.188 B:Q9UBU9:0.188
2z5m 1 Q92973 84.39 0.0 X-RAY
 2007-10-23 TRP A:373 A:373 94.0 0.369 S -159.1 123.4 94.0 0.369 0.0
2z5n 1 Q92973 84.39 0.0 X-RAY
 2007-10-23 TRP A:373 A:373 96.0 0.376 S -129.7 98.4 96.0 0.376 0.0
2z5o 1 Q92973 84.39 0.0 X-RAY
 2007-10-23 TRP A:373 A:373 103.0 0.404 -139.1 98.1 103.0 0.404 0.0
4fq3 1 Q92973 84.39 0.0 X-RAY
 2013-08-21 TRP A:373 A:373 113.0 0.443 -56.4 124.3 97.0 0.38 0.063 B:Q8TBR3:0.063
1qbk 1 Q92973 84.28 0.0 X-RAY
 1999-06-01 TRP A:373 B:373 182.0 0.714 -104.1 43.0 36.0 0.141 0.573 B:P62826:0.573
5yvg 1 Q92973 83.26 0.0 X-RAY
 2018-05-16 TRP A:351 A:373 112.0 0.439 S -160.1 102.3 112.0 0.439 0.0
TRP B:351 B:373 128.0 0.502 S -157.9 100.5 NA NA NA
5yvh 1 Q92973 83.26 0.0 X-RAY
 2018-05-16 TRP A:351 A:373 125.0 0.49 -62.4 128.1 106.0 0.416 0.074 B:P35637:0.075
5yvi 1 Q92973 83.26 0.0 X-RAY
 2018-05-16 TRP A:351 A:373 118.0 0.463 -149.8 122.7 104.0 0.408 0.055 B:P35637:0.055
7cyl 1 Q92973 83.26 0.0 X-RAY
 2021-02-24 TRP A:351 A:373 102.0 0.4 S -61.5 129.4 89.0 0.349 0.051 B:P35637:0.051
2h4m 1 Q92973 83.04 0.0 X-RAY
 2006-10-24 TRP A:348 A:373 101.0 0.396 S -138.7 136.7 89.0 0.349 0.047 C:P09651:0.047
TRP B:348 B:373 105.0 0.412 S -158.7 120.7 92.0 0.361 0.051 D:P09651:0.051
5tqc 1 Q92973 82.92 0.0 X-RAY
 2017-02-15 TRP A:349 A:373 94.0 0.369 S -151.6 128.1 84.0 0.329 0.04 B:G0SFC3:0.039
2ot8 1 Q92973 82.25 0.0 X-RAY
 2007-04-10 TRP A:335 A:373 102.0 0.4 S -138.7 134.4 33.0 0.129 0.271 C:P52272:0.271
TRP B:335 B:373 94.0 0.369 S -141.7 132.6 NA NA NA
4fdd 1 Q92973 82.25 0.0 X-RAY
 2012-07-18 TRP A:335 A:373 115.0 0.451 -62.1 128.3 102.0 0.4 0.051 B:P35637:0.051
 HOH
 3.343
 N
 O
4jlq 1 Q92973 81.81 0.0 X-RAY
 2013-04-03 TRP A:337 A:373 93.0 0.365 S -137.9 129.8 79.0 0.31 0.055 B:P32505:0.055
4oo6 1 Q92973 81.81 0.0 X-RAY
 2014-02-12 TRP A:337 A:373 114.0 0.447 -32.4 125.6 100.0 0.392 0.055 B:Q14498:0.055
 HOH
 7.768
 NE1
 O
5j3v 1 Q92973 81.81 0.0 X-RAY
 2016-09-21 TRP A:337 A:373 96.0 0.376 S -135.4 114.1 96.0 0.376 0.0
TRP C:337 B:373 107.0 0.42 S -161.0 123.1 NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-o14787-f1 1 O14787 100.0 0.0 TRP A:370 A:370 106.0 0.416 -60.3 127.4
af-q92973-f1 1 Q92973 84.39 0.0 TRP A:381 A:381 119.0 0.467 S -52.6 120.6