Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr19 12826125 . C A CCDS45991.1:NM_001136196.1:c.580Gcc>Tcc_NP_001129668.1:p.194A>S Homo sapiens transportin 2 (TNPO2), transcript variant 1, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
2qmr 1 Q92973 84.39 0.0 X-RAY
 2007-10-30 ALA A:196 A:196 5.0 0.043 H -63.3 -41.9 5.0 0.043 0.0
ALA B:196 B:196 0.0 0.0 H -54.3 -47.5 NA NA NA
ALA C:196 C:196 0.0 0.0 H -53.4 -49.2 NA NA NA
ALA D:196 D:196 3.0 0.026 H -64.5 -41.6 NA NA NA
2z5j 1 Q92973 84.39 0.0 X-RAY
 2007-10-23 ALA A:196 A:196 6.0 0.052 H -39.4 -54.0 6.0 0.052 0.0
2z5k 1 Q92973 84.39 0.0 X-RAY
 2007-10-23 ALA A:196 A:196 5.0 0.043 H -50.7 -44.1 5.0 0.043 0.0 HOH
 9.028
 O
 O
2z5m 1 Q92973 84.39 0.0 X-RAY
 2007-10-23 ALA A:196 A:196 8.0 0.07 H -61.4 -42.5 8.0 0.07 0.0
2z5n 1 Q92973 84.39 0.0 X-RAY
 2007-10-23 ALA A:196 A:196 10.0 0.087 H -58.8 -51.0 10.0 0.087 0.0
2z5o 1 Q92973 84.39 0.0 X-RAY
 2007-10-23 ALA A:196 A:196 7.0 0.061 H -55.5 -36.9 7.0 0.061 0.0
4fq3 1 Q92973 84.39 0.0 X-RAY
 2013-08-21 ALA A:196 A:196 8.0 0.07 H -59.0 -48.0 8.0 0.07 0.0
1qbk 1 Q92973 84.28 0.0 X-RAY
 1999-06-01 ALA A:196 B:196 8.0 0.07 H -63.3 -62.7 8.0 0.07 0.0
5yvg 1 Q92973 83.26 0.0 X-RAY
 2018-05-16 ALA A:198 A:196 8.0 0.07 H -63.2 -31.3 8.0 0.07 0.0
ALA B:198 B:196 2.0 0.017 H -63.5 -31.2 NA NA NA
5yvh 1 Q92973 83.26 0.0 X-RAY
 2018-05-16 ALA A:198 A:196 7.0 0.061 H -56.7 -32.6 7.0 0.061 0.0
5yvi 1 Q92973 83.26 0.0 X-RAY
 2018-05-16 ALA A:198 A:196 5.0 0.043 H -62.5 -43.9 5.0 0.043 0.0
7cyl 1 Q92973 83.26 0.0 X-RAY
 2021-02-24 ALA A:198 A:196 5.0 0.043 H -57.2 -32.5 5.0 0.043 0.0
2h4m 1 Q92973 83.04 0.0 X-RAY
 2006-10-24 ALA A:196 A:196 2.0 0.017 H -56.5 -48.8 2.0 0.017 0.0
ALA B:196 B:196 1.0 0.009 H -64.9 -40.3 1.0 0.009 0.0
5tqc 1 Q92973 82.92 0.0 X-RAY
 2017-02-15 ALA A:196 A:196 3.0 0.026 H -61.8 -35.3 3.0 0.026 0.0
2ot8 1 Q92973 82.25 0.0 X-RAY
 2007-04-10 ALA A:196 A:196 0.0 0.0 H -62.7 -46.7 0.0 0.0 0.0
ALA B:196 B:196 2.0 0.017 H -68.9 -37.5 NA NA NA
4fdd 1 Q92973 82.25 0.0 X-RAY
 2012-07-18 ALA A:196 A:196 5.0 0.043 H -56.0 -32.0 5.0 0.043 0.0 HOH
 5.764
 C
 O
4jlq 1 Q92973 81.81 0.0 X-RAY
 2013-04-03 ALA A:196 A:196 2.0 0.017 H -52.7 -53.2 2.0 0.017 0.0
4oo6 1 Q92973 81.81 0.0 X-RAY
 2014-02-12 ALA A:196 A:196 2.0 0.017 H -59.2 -43.8 2.0 0.017 0.0 HOH
 9.018
 O
 O
5j3v 1 Q92973 81.81 0.0 X-RAY
 2016-09-21 ALA A:196 A:196 5.0 0.043 H -65.2 -38.3 5.0 0.043 0.0
ALA C:196 B:196 7.0 0.061 H -77.8 -12.3 NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-o14787-f1 1 O14787 100.0 0.0 ALA A:194 A:194 3.0 0.026 H -58.4 -36.2
af-q92973-f1 1 Q92973 84.39 0.0 ALA A:204 A:204 4.0 0.035 H -59.4 -38.7