Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr19 1397399 . C A CCDS12064.1:NM_000156.5:c.670Gcc>Tcc_NP_000147.1:p.224A>S Homo sapiens guanidinoacetate N-methyltransferase (GAMT), transcript variant 1, mRNA.
pdb_id: 
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alphafold_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
3orh 1 Q14353 100.0 3e-180 X-RAY
 2010-09-15 ALA A:224 A:224 59.0 0.513 -131.3 -13.2 59.0 0.513 0.0 HOH
 2.678
 O
 O
ALA B:224 B:224 59.0 0.513 -131.4 -12.7 NA NA NA
ALA C:224 C:224 61.0 0.53 -131.6 -12.9 NA NA NA
ALA D:224 D:224 59.0 0.513 -128.9 -14.2 NA NA NA
1xcj 1 P10868 87.18 6e-156 X-RAY
 2004-12-07 ALA A:223 A:223 67.0 0.583 -119.9 -21.6 67.0 0.583 0.0 HOH
 2.696
 O
 O
1xcl 1 P10868 87.18 6e-156 X-RAY
 2004-12-07 ALA A:223 A:223 67.0 0.583 -127.6 -11.2 67.0 0.583 0.0 HOH
 2.709
 O
 O
1p1b 1 P10868 90.4 1e-134 X-RAY
 2003-04-29 ALA A:187 A:223 55.0 0.478 -123.5 -9.6 41.0 0.357 0.121 B:P10868:0.122
 SAH
HOH
 9.261
3.860
 CB
CB
 O2'
O
ALA B:187 B:223 58.0 0.504 -127.8 -3.6 58.0 0.504 0.0 SAH
HOH
 8.841
2.917
 CB
O
 O2'
O
ALA C:187 C:223 57.0 0.496 -125.6 -8.7 NA NA NA
ALA D:187 D:223 58.0 0.504 -125.0 -9.8 NA NA NA
1p1c 1 P10868 90.4 1e-134 X-RAY
 2003-04-29 ALA A:187 A:223 58.0 0.504 -130.5 -8.7 40.0 0.348 0.156 B:P10868:0.157
 SAH
HOH
 8.200
2.882
 CB
O
 O2'
O
ALA B:187 B:223 62.0 0.539 -125.3 -6.1 48.0 0.417 0.122 A:P10868:0.122
 SAH
HOH
 8.586
5.059
 CB
O
 O2'
O
1khh 1 P10868 90.36 8e-134 X-RAY
 2001-12-12 ALA A:186 A:223 58.0 0.504 -127.1 -9.4 45.0 0.391 0.113 B:P10868:0.113
 SAH
HOH
 8.504
2.964
 CB
O
 O2'
O
ALA B:186 B:223 60.0 0.522 -127.8 -8.5 49.0 0.426 0.096 A:P10868:0.096
 SAH
HOH
 8.448
2.847
 CB
N
 O2'
O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q14353-f1 1 Q14353 100.0 1e-180 ALA A:224 A:224 86.0 0.748 -134.2 -4.7