Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr19 1397408 . G A CCDS12064.1:NM_000156.5:c.661Cgc>Tgc_NP_000147.1:p.221R>C Homo sapiens guanidinoacetate N-methyltransferase (GAMT), transcript variant 1, mRNA.
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alphafold_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
3orh 1 Q14353 100.0 3e-180 X-RAY
 2010-09-15 ARG A:221 A:221 115.0 0.511 S -74.6 -32.0 115.0 0.511 0.0 HOH
 2.720
 NH2
 O
ARG B:221 B:221 134.0 0.596 S -74.4 -20.7 NA NA NA
ARG C:221 C:221 106.0 0.471 S -65.9 -36.3 NA NA NA
ARG D:221 D:221 231.0 1.0 S -82.0 -17.7 NA NA NA
1xcj 1 P10868 87.18 6e-156 X-RAY
 2004-12-07 ARG A:220 A:220 115.0 0.511 S -79.5 -21.2 115.0 0.511 0.0 NMG
HOH
 9.777
3.543
 C
O
 NH2
O
1xcl 1 P10868 87.18 6e-156 X-RAY
 2004-12-07 ARG A:220 A:220 134.0 0.596 S -85.1 -7.0 134.0 0.596 0.0 GAI
HOH
 9.802
4.523
 C
O
 N1
O
1p1b 1 P10868 90.4 1e-134 X-RAY
 2003-04-29 ARG A:184 A:220 238.0 1.0 S -82.4 -16.3 27.0 0.12 0.88 F:None:0.12
B:P10868:0.898
 SAH
HOH
 4.469
3.701
 NH2
N
 CB
O
ARG B:184 B:220 236.0 1.0 S -78.2 -17.7 23.0 0.102 0.898 A:P10868:0.929
E:None:0.133
 SAH
HOH
 4.475
3.059
 NH2
NE
 CB
O
ARG C:184 C:220 235.0 1.0 S -79.9 -15.5 NA NA NA
ARG D:184 D:220 234.0 1.0 S -80.2 -16.0 NA NA NA
1p1c 1 P10868 90.4 1e-134 X-RAY
 2003-04-29 ARG A:184 A:220 232.0 1.0 S -79.0 -9.6 19.0 0.084 0.916 E:None:0.187
B:P10868:0.898
 SAH
HOH
 3.554
2.773
 NH2
NH1
 CB
O
ARG B:184 B:220 223.0 0.991 S -78.1 -17.1 20.0 0.089 0.902 C:None:0.156
A:P10868:0.853
 SAH
HOH
 3.876
3.577
 NH2
NE
 CB
O
1khh 1 P10868 90.36 8e-134 X-RAY
 2001-12-12 ARG A:183 A:220 227.0 1.0 S -77.8 -15.3 14.0 0.062 0.938 D:None:0.147
B:P10868:0.907
 SAH
HOH
 4.132
3.714
 NH2
N
 CB
O
ARG B:183 B:220 229.0 1.0 S -76.5 -18.4 18.0 0.08 0.92 A:P10868:0.884
C:None:0.169
 SAH
HOH
 3.874
3.557
 NH2
NH2
 CB
O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q14353-f1 1 Q14353 100.0 1e-180 ARG A:221 A:221 92.0 0.409 S -82.0 -20.2