Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr19 1397414 . C A CCDS12064.1:NM_000156.5:c.655Gac>Tac_NP_000147.1:p.219D>Y Homo sapiens guanidinoacetate N-methyltransferase (GAMT), transcript variant 1, mRNA.
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alphafold_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
3orh 1 Q14353 100.0 3e-180 X-RAY
 2010-09-15 ASP A:219 A:219 145.0 0.967 T -88.2 6.4 145.0 0.967 0.0 HOH
 3.396
 CA
 O
ASP B:219 B:219 119.0 0.793 T -93.3 3.4 NA NA NA
ASP C:219 C:219 140.0 0.933 T -92.6 6.8 NA NA NA
ASP D:219 D:219 129.0 0.86 T -95.4 6.4 NA NA NA
1xcj 1 P10868 87.18 6e-156 X-RAY
 2004-12-07 ASP A:218 A:218 102.0 0.68 T -77.0 4.3 102.0 0.68 0.0 HOH
 4.188
 C
 O
1xcl 1 P10868 87.18 6e-156 X-RAY
 2004-12-07 ASP A:218 A:218 107.0 0.713 T -84.2 -1.1 107.0 0.713 0.0 HOH
 3.198
 N
 O
1p1b 1 P10868 90.4 1e-134 X-RAY
 2003-04-29 ASP A:182 A:218 117.0 0.78 T -97.9 12.8 17.0 0.113 0.667 F:None:0.28
B:P10868:0.54
 SAH
HOH
 3.578
4.586
 CA
O
 SD
O
ASP B:182 B:218 114.0 0.76 T -98.0 14.7 11.0 0.073 0.687 A:P10868:0.64
E:None:0.267
 SAH
HOH
 3.778
3.288
 CA
OD1
 SD
O
ASP C:182 C:218 118.0 0.787 T -95.7 12.5 NA NA NA
ASP D:182 D:218 118.0 0.787 T -96.3 10.3 NA NA NA
1p1c 1 P10868 90.4 1e-134 X-RAY
 2003-04-29 ASP A:182 A:218 115.0 0.767 T -103.1 23.5 16.0 0.107 0.66 E:None:0.227
B:P10868:0.58
 SAH
HOH
 3.706
2.850
 CA
O
 SD
O
ASP B:182 B:218 115.0 0.767 T -100.7 24.2 15.0 0.1 0.667 C:None:0.24
A:P10868:0.56
 SAH
HOH
 3.761
3.090
 CA
O
 SD
O
1khh 1 P10868 90.36 8e-134 X-RAY
 2001-12-12 ASP A:181 A:218 116.0 0.773 T -100.1 29.2 18.0 0.12 0.653 D:None:0.233
B:P10868:0.54
 SAH
HOH
 3.541
2.562
 CA
OD2
 SD
O
ASP B:181 B:218 115.0 0.767 T -98.7 26.9 13.0 0.087 0.68 A:P10868:0.593
C:None:0.22
 SAH
HOH
 3.850
2.949
 CA
O
 SD
O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q14353-f1 1 Q14353 100.0 1e-180 ASP A:219 A:219 120.0 0.8 T -94.5 1.2