Variant
Genome | Chromosome | Position | VCF ID | Ref | Alt | mRNA Change | mRNA Info | GRCh37 | chr19 | 1397488 | . | A | C | CCDS12064.1:NM_000156.5:c.581gTg>gGg_NP_000147.1:p.194V>G | Homo sapiens guanidinoacetate N-methyltransferase (GAMT), transcript variant 1, mRNA. |
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PDB
Entity | Residue | Monomer | BioUnit | Ligand | View | ||||||||||||||||||
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PDB | Entity | Uniprot | Identity | Evalue | ExpMethod | Date | Name | Label | Auth | ASA | rASA | SS | φ | ψ | ASA | rASA | ΔASA | Interaction | Name | Distance | Atom(p) | Atom(l) | |
3orh | 1 | Q14353 | 100.0 | 3e-180 |
X-RAY |
2010-09-15 | VAL | A:194 | A:194 | 5.0 | 0.032 | H | -53.9 | -46.2 | 5.0 | 0.032 | 0.0 |
HOH |
3.464 |
CG1 |
O |
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VAL | B:194 | B:194 | 6.0 | 0.039 | H | -51.6 | -46.5 | NA | NA | NA | |||||||||||||
VAL | C:194 | C:194 | 5.0 | 0.032 | H | -53.5 | -46.9 | NA | NA | NA | |||||||||||||
VAL | D:194 | D:194 | 4.0 | 0.026 | H | -54.4 | -45.0 | NA | NA | NA | |||||||||||||
1xcj | 1 | P10868 | 87.18 | 6e-156 |
X-RAY |
2004-12-07 | VAL | A:193 | A:193 | 4.0 | 0.026 | H | -50.8 | -42.6 | 4.0 | 0.026 | 0.0 |
HOH |
4.672 |
C |
O |
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1xcl | 1 | P10868 | 87.18 | 6e-156 |
X-RAY |
2004-12-07 | VAL | A:193 | A:193 | 5.0 | 0.032 | H | -51.7 | -42.8 | 5.0 | 0.032 | 0.0 |
HOH |
4.087 |
CG1 |
O |
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1p1b | 1 | P10868 | 90.4 | 1e-134 |
X-RAY |
2003-04-29 | VAL | A:157 | A:193 | 7.0 | 0.045 | H | -48.5 | -50.5 | 7.0 | 0.045 | 0.0 |
HOH |
4.856 |
CG1 |
O |
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VAL | B:157 | B:193 | 8.0 | 0.052 | H | -43.9 | -51.0 | 8.0 | 0.052 | 0.0 |
HOH |
4.332 |
CB |
O |
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VAL | C:157 | C:193 | 8.0 | 0.052 | H | -47.1 | -51.8 | NA | NA | NA | |||||||||||||
VAL | D:157 | D:193 | 7.0 | 0.045 | H | -49.6 | -51.8 | NA | NA | NA | |||||||||||||
1p1c | 1 | P10868 | 90.4 | 1e-134 |
X-RAY |
2003-04-29 | VAL | A:157 | A:193 | 6.0 | 0.039 | H | -62.8 | -29.0 | 6.0 | 0.039 | 0.0 |
HOH |
4.187 |
CG2 |
O |
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VAL | B:157 | B:193 | 8.0 | 0.052 | H | -57.3 | -33.6 | 8.0 | 0.052 | 0.0 |
HOH |
3.432 |
CG2 |
O |
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1khh | 1 | P10868 | 90.36 | 8e-134 |
X-RAY |
2001-12-12 | VAL | A:156 | A:193 | 8.0 | 0.052 | H | -61.1 | -32.1 | 8.0 | 0.052 | 0.0 |
HOH |
4.299 |
CG2 |
O |
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VAL | B:156 | B:193 | 8.0 | 0.052 | H | -58.1 | -33.8 | 8.0 | 0.052 | 0.0 |
HOH |
3.740 |
CG2 |
O |
AlphaFold DB
Entity | Residue | Monomer | View | ||||||||||
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ID | Entity | Uniprot | Identity | Evalue | Name | Label | Auth | ASA | rASA | SS | φ | ψ | |
af-q14353-f1 | 1 | Q14353 | 100.0 | 1e-180 | VAL | A:194 | A:194 | 5.0 | 0.032 | H | -60.2 | -43.9 |