Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr19 1397488 . A C CCDS12064.1:NM_000156.5:c.581gTg>gGg_NP_000147.1:p.194V>G Homo sapiens guanidinoacetate N-methyltransferase (GAMT), transcript variant 1, mRNA.
pdb_id
label_asym_id
label_seq_id
label_comp_id
auth_asym_id
auth_seq_id
alphafold_id
label_asym_id
label_seq_id
label_comp_id
auth_asym_id
auth_seq_id

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
3orh 1 Q14353 100.0 3e-180 X-RAY
2010-09-15 VAL A:194 A:194 5.0 0.032 H -53.9 -46.2 5.0 0.032 0.0 HOH
3.464
CG1
O
VAL B:194 B:194 6.0 0.039 H -51.6 -46.5 NA NA NA
VAL C:194 C:194 5.0 0.032 H -53.5 -46.9 NA NA NA
VAL D:194 D:194 4.0 0.026 H -54.4 -45.0 NA NA NA
1xcj 1 P10868 87.18 6e-156 X-RAY
2004-12-07 VAL A:193 A:193 4.0 0.026 H -50.8 -42.6 4.0 0.026 0.0 HOH
4.672
C
O
1xcl 1 P10868 87.18 6e-156 X-RAY
2004-12-07 VAL A:193 A:193 5.0 0.032 H -51.7 -42.8 5.0 0.032 0.0 HOH
4.087
CG1
O
1p1b 1 P10868 90.4 1e-134 X-RAY
2003-04-29 VAL A:157 A:193 7.0 0.045 H -48.5 -50.5 7.0 0.045 0.0 HOH
4.856
CG1
O
VAL B:157 B:193 8.0 0.052 H -43.9 -51.0 8.0 0.052 0.0 HOH
4.332
CB
O
VAL C:157 C:193 8.0 0.052 H -47.1 -51.8 NA NA NA
VAL D:157 D:193 7.0 0.045 H -49.6 -51.8 NA NA NA
1p1c 1 P10868 90.4 1e-134 X-RAY
2003-04-29 VAL A:157 A:193 6.0 0.039 H -62.8 -29.0 6.0 0.039 0.0 HOH
4.187
CG2
O
VAL B:157 B:193 8.0 0.052 H -57.3 -33.6 8.0 0.052 0.0 HOH
3.432
CG2
O
1khh 1 P10868 90.36 8e-134 X-RAY
2001-12-12 VAL A:156 A:193 8.0 0.052 H -61.1 -32.1 8.0 0.052 0.0 HOH
4.299
CG2
O
VAL B:156 B:193 8.0 0.052 H -58.1 -33.8 8.0 0.052 0.0 HOH
3.740
CG2
O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q14353-f1 1 Q14353 100.0 1e-180 VAL A:194 A:194 5.0 0.032 H -60.2 -43.9