Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr19 1398959 . C A CCDS12064.1:NM_000156.5:c.526Gag>Tag_NP_000147.1:p.176E>* Homo sapiens guanidinoacetate N-methyltransferase (GAMT), transcript variant 1, mRNA.
pdb_id: 
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alphafold_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
3orh 1 Q14353 100.0 3e-180 X-RAY
 2010-09-15 GLU A:176 A:176 97.0 0.511 H -67.6 -48.9 97.0 0.511 0.0 HOH
 3.374
 CG
 O
GLU B:176 B:176 70.0 0.368 H -68.3 -44.8 NA NA NA
GLU C:176 C:176 82.0 0.432 H -64.2 -50.9 NA NA NA
GLU D:176 D:176 81.0 0.426 H -71.6 -44.9 NA NA NA
1xcj 1 P10868 87.18 6e-156 X-RAY
 2004-12-07 GLU A:175 A:175 65.0 0.342 H -70.7 -37.1 65.0 0.342 0.0 NMG
HOH
 9.283
3.494
 N
N
 O1
O
1xcl 1 P10868 87.18 6e-156 X-RAY
 2004-12-07 GLU A:175 A:175 62.0 0.326 H -73.2 -32.4 62.0 0.326 0.0 HOH
 3.337
 N
 O
1p1b 1 P10868 90.4 1e-134 X-RAY
 2003-04-29 GLU A:139 A:175 91.0 0.479 H -71.9 -56.0 19.0 0.1 0.379 B:P10868:0.379
 HOH
 4.564
 OE2
 O
GLU B:139 B:175 89.0 0.468 H -71.8 -60.3 7.0 0.037 0.431 A:P10868:0.432
 HOH
 3.089
 OE1
 O
GLU C:139 C:175 90.0 0.474 H -70.8 -61.0 NA NA NA
GLU D:139 D:175 90.0 0.474 H -70.8 -59.7 NA NA NA
1p1c 1 P10868 90.4 1e-134 X-RAY
 2003-04-29 GLU A:139 A:175 112.0 0.589 H -81.6 -40.0 29.0 0.153 0.436 B:P10868:0.437
 HOH
 3.092
 OE1
 O
GLU B:139 B:175 73.0 0.384 H -81.7 -42.8 27.0 0.142 0.242 A:P10868:0.242
 GD3
HOH
 7.934
4.083
 O
CB
 GD
O
1khh 1 P10868 90.36 8e-134 X-RAY
 2001-12-12 GLU A:138 A:175 107.0 0.563 H -80.3 -38.8 30.0 0.158 0.405 B:P10868:0.405
 HOH
 4.943
 OE2
 O
GLU B:138 B:175 100.0 0.526 H -80.0 -39.5 30.0 0.158 0.368 A:P10868:0.368
 HOH
 2.603
 O
 O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q14353-f1 1 Q14353 100.0 1e-180 GLU A:176 A:176 60.0 0.316 H -67.3 -39.8