Variant
Genome | Chromosome | Position | VCF ID | Ref | Alt | mRNA Change | mRNA Info | GRCh37 | chr19 | 1398964 | . | C | A | CCDS12064.1:NM_000156.5:c.521tGg>tTg_NP_000147.1:p.174W>L | Homo sapiens guanidinoacetate N-methyltransferase (GAMT), transcript variant 1, mRNA. |
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PDB
Entity | Residue | Monomer | BioUnit | Ligand | View | ||||||||||||||||||
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PDB | Entity | Uniprot | Identity | Evalue | ExpMethod | Date | Name | Label | Auth | ASA | rASA | SS | φ | ψ | ASA | rASA | ΔASA | Interaction | Name | Distance | Atom(p) | Atom(l) | |
3orh | 1 | Q14353 | 100.0 | 3e-180 |
X-RAY |
2010-09-15 | TRP | A:174 | A:174 | 1.0 | 0.004 | H | -67.1 | -34.1 | 1.0 | 0.004 | 0.0 |
HOH |
3.449 |
CE3 |
O |
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TRP | B:174 | B:174 | 1.0 | 0.004 | H | -60.4 | -36.9 | NA | NA | NA | |||||||||||||
TRP | C:174 | C:174 | 0.0 | 0.0 | H | -71.0 | -29.4 | NA | NA | NA | |||||||||||||
TRP | D:174 | D:174 | 0.0 | 0.0 | H | -65.3 | -36.4 | NA | NA | NA | |||||||||||||
1xcj | 1 | P10868 | 87.18 | 6e-156 |
X-RAY |
2004-12-07 | TRP | A:173 | A:173 | 0.0 | 0.0 | H | -57.4 | -41.5 | 0.0 | 0.0 | 0.0 |
NMG HOH |
6.945 3.340 |
N CE3 |
O1 O |
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1xcl | 1 | P10868 | 87.18 | 6e-156 |
X-RAY |
2004-12-07 | TRP | A:173 | A:173 | 1.0 | 0.004 | H | -56.2 | -40.1 | 1.0 | 0.004 | 0.0 |
GAI HOH |
9.262 3.263 |
CE3 CE3 |
N2 O |
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1p1b | 1 | P10868 | 90.4 | 1e-134 |
X-RAY |
2003-04-29 | TRP | A:137 | A:173 | 0.0 | 0.0 | H | -66.8 | -26.2 | 0.0 | 0.0 | 0.0 |
HOH |
3.395 |
CE3 |
O |
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TRP | B:137 | B:173 | 0.0 | 0.0 | H | -67.4 | -30.1 | 0.0 | 0.0 | 0.0 |
HOH |
6.681 |
N |
O |
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TRP | C:137 | C:173 | 0.0 | 0.0 | H | -65.6 | -24.8 | NA | NA | NA | |||||||||||||
TRP | D:137 | D:173 | 0.0 | 0.0 | H | -67.4 | -27.1 | NA | NA | NA | |||||||||||||
1p1c | 1 | P10868 | 90.4 | 1e-134 |
X-RAY |
2003-04-29 | TRP | A:137 | A:173 | 0.0 | 0.0 | H | -61.4 | -41.9 | 0.0 | 0.0 | 0.0 |
HOH |
3.204 |
NE1 |
O |
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TRP | B:137 | B:173 | 0.0 | 0.0 | H | -74.9 | -36.9 | 0.0 | 0.0 | 0.0 |
HOH |
3.357 |
NE1 |
O |
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1khh | 1 | P10868 | 90.36 | 8e-134 |
X-RAY |
2001-12-12 | TRP | A:136 | A:173 | 0.0 | 0.0 | H | -67.2 | -34.8 | 0.0 | 0.0 | 0.0 |
HOH |
6.869 |
O |
O |
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TRP | B:136 | B:173 | 0.0 | 0.0 | H | -71.0 | -35.4 | 0.0 | 0.0 | 0.0 |
HOH |
4.672 |
O |
O |
AlphaFold DB
Entity | Residue | Monomer | View | ||||||||||
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ID | Entity | Uniprot | Identity | Evalue | Name | Label | Auth | ASA | rASA | SS | φ | ψ | |
af-q14353-f1 | 1 | Q14353 | 100.0 | 1e-180 | TRP | A:174 | A:174 | 1.0 | 0.004 | H | -64.8 | -38.5 |