Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr19 1398965 . A C CCDS12064.1:NM_000156.5:c.520Tgg>Ggg_NP_000147.1:p.174W>G Homo sapiens guanidinoacetate N-methyltransferase (GAMT), transcript variant 1, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
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auth_asym_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
3orh 1 Q14353 100.0 3e-180 X-RAY
 2010-09-15 TRP A:174 A:174 1.0 0.004 H -67.1 -34.1 1.0 0.004 0.0 HOH
 3.449
 CE3
 O
TRP B:174 B:174 1.0 0.004 H -60.4 -36.9 NA NA NA
TRP C:174 C:174 0.0 0.0 H -71.0 -29.4 NA NA NA
TRP D:174 D:174 0.0 0.0 H -65.3 -36.4 NA NA NA
1xcj 1 P10868 87.18 6e-156 X-RAY
 2004-12-07 TRP A:173 A:173 0.0 0.0 H -57.4 -41.5 0.0 0.0 0.0 NMG
HOH
 6.945
3.340
 N
CE3
 O1
O
1xcl 1 P10868 87.18 6e-156 X-RAY
 2004-12-07 TRP A:173 A:173 1.0 0.004 H -56.2 -40.1 1.0 0.004 0.0 GAI
HOH
 9.262
3.263
 CE3
CE3
 N2
O
1p1b 1 P10868 90.4 1e-134 X-RAY
 2003-04-29 TRP A:137 A:173 0.0 0.0 H -66.8 -26.2 0.0 0.0 0.0 HOH
 3.395
 CE3
 O
TRP B:137 B:173 0.0 0.0 H -67.4 -30.1 0.0 0.0 0.0 HOH
 6.681
 N
 O
TRP C:137 C:173 0.0 0.0 H -65.6 -24.8 NA NA NA
TRP D:137 D:173 0.0 0.0 H -67.4 -27.1 NA NA NA
1p1c 1 P10868 90.4 1e-134 X-RAY
 2003-04-29 TRP A:137 A:173 0.0 0.0 H -61.4 -41.9 0.0 0.0 0.0 HOH
 3.204
 NE1
 O
TRP B:137 B:173 0.0 0.0 H -74.9 -36.9 0.0 0.0 0.0 HOH
 3.357
 NE1
 O
1khh 1 P10868 90.36 8e-134 X-RAY
 2001-12-12 TRP A:136 A:173 0.0 0.0 H -67.2 -34.8 0.0 0.0 0.0 HOH
 6.869
 O
 O
TRP B:136 B:173 0.0 0.0 H -71.0 -35.4 0.0 0.0 0.0 HOH
 4.672
 O
 O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q14353-f1 1 Q14353 100.0 1e-180 TRP A:174 A:174 1.0 0.004 H -64.8 -38.5