Variant
| Genome | Chromosome | Position | VCF ID | Ref | Alt | mRNA Change | mRNA Info | GRCh37 | chr19 | 1398980 | . | A | C | CCDS12064.1:NM_000156.5:c.505Tgc>Ggc_NP_000147.1:p.169C>G | Homo sapiens guanidinoacetate N-methyltransferase (GAMT), transcript variant 1, mRNA. |
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PDB
| Entity | Residue | Monomer | BioUnit | Ligand | View | ||||||||||||||||||
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| PDB | Entity | Uniprot | Identity | Evalue | ExpMethod | Date | Name | Label | Auth | ASA | rASA | SS | φ | ψ | ASA | rASA | ΔASA | Interaction | Name | Distance | Atom(p) | Atom(l) | |
| 3orh | 1 | Q14353 | 100.0 | 3e-180 |
X-RAY |
2010-09-15 | CYS | A:169 | A:169 | 0.0 | 0.0 | -153.5 | 160.1 | 0.0 | 0.0 | 0.0 |
SAH HOH |
6.312 2.469 |
SG O |
N O |
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| CYS | B:169 | B:169 | 0.0 | 0.0 | -155.6 | 163.0 | NA | NA | NA | ||||||||||||||
| CYS | C:169 | C:169 | 1.0 | 0.007 | -153.2 | 163.2 | NA | NA | NA | ||||||||||||||
| CYS | D:169 | D:169 | 0.0 | 0.0 | -154.3 | 161.7 | NA | NA | NA | ||||||||||||||
| 1xcj | 1 | P10868 | 87.18 | 6e-156 |
X-RAY |
2004-12-07 | CYS | A:168 | A:168 | 0.0 | 0.0 | -167.4 | 147.7 | 0.0 | 0.0 | 0.0 |
SAH NMG HOH |
6.129 3.647 2.657 |
SG O O |
N O2 O |
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| 1xcl | 1 | P10868 | 87.18 | 6e-156 |
X-RAY |
2004-12-07 | CYS | A:168 | A:168 | 0.0 | 0.0 | -167.5 | 152.5 | 0.0 | 0.0 | 0.0 |
SAH GAI HOH |
6.311 4.397 2.614 |
SG SG O |
N N2 O |
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| 1p1b | 1 | P10868 | 90.4 | 1e-134 |
X-RAY |
2003-04-29 | CYS | A:132 | A:168 | 0.0 | 0.0 | E | -174.9 | 150.7 | 0.0 | 0.0 | 0.0 |
SAH HOH |
7.105 5.847 |
SG CB |
N O |
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| CYS | B:132 | B:168 | 0.0 | 0.0 | -177.6 | 153.4 | 0.0 | 0.0 | 0.0 |
SAH HOH |
7.003 5.923 |
SG O |
N O |
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| CYS | C:132 | C:168 | 0.0 | 0.0 | E | -172.4 | 152.3 | NA | NA | NA | |||||||||||||
| CYS | D:132 | D:168 | 0.0 | 0.0 | E | -177.3 | 149.7 | NA | NA | NA | |||||||||||||
| 1p1c | 1 | P10868 | 90.4 | 1e-134 |
X-RAY |
2003-04-29 | CYS | A:132 | A:168 | 0.0 | 0.0 | E | -168.0 | 152.3 | 0.0 | 0.0 | 0.0 |
SAH HOH |
6.589 6.940 |
SG C |
N O |
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| CYS | B:132 | B:168 | 0.0 | 0.0 | E | -167.5 | 154.7 | 0.0 | 0.0 | 0.0 |
SAH HOH |
6.340 3.170 |
SG SG |
N O |
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| 1khh | 1 | P10868 | 90.36 | 8e-134 |
X-RAY |
2001-12-12 | CYS | A:131 | A:168 | 0.0 | 0.0 | -163.3 | 161.4 | 0.0 | 0.0 | 0.0 |
SAH HOH |
6.518 8.577 |
SG SG |
N O |
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| CYS | B:131 | B:168 | 0.0 | 0.0 | -162.8 | 163.8 | 0.0 | 0.0 | 0.0 |
SAH HOH |
6.402 9.422 |
SG SG |
N O |
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AlphaFold DB
| Entity | Residue | Monomer | View | ||||||||||
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| ID | Entity | Uniprot | Identity | Evalue | Name | Label | Auth | ASA | rASA | SS | φ | ψ | |
| af-q14353-f1 | 1 | Q14353 | 100.0 | 1e-180 | CYS | A:169 | A:169 | 1.0 | 0.007 | -141.8 | 162.4 | ||