Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr19 1398992 . C A CCDS12064.1:NM_000156.5:c.493Gtc>Ttc_NP_000147.1:p.165V>F Homo sapiens guanidinoacetate N-methyltransferase (GAMT), transcript variant 1, mRNA.
pdb_id: 
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alphafold_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
3orh 1 Q14353 100.0 3e-180 X-RAY
 2010-09-15 VAL A:165 A:165 4.0 0.026 E -114.3 130.6 4.0 0.026 0.0 HOH
 4.744
 CG1
 O
VAL B:165 B:165 4.0 0.026 E -114.0 131.3 NA NA NA
VAL C:165 C:165 8.0 0.052 E -115.6 130.9 NA NA NA
VAL D:165 D:165 7.0 0.045 E -115.8 132.7 NA NA NA
1xcj 1 P10868 87.18 6e-156 X-RAY
 2004-12-07 ILE A:164 A:164 4.0 0.023 E -130.0 143.3 4.0 0.023 0.0 HOH
 4.459
 CD1
 O
1xcl 1 P10868 87.18 6e-156 X-RAY
 2004-12-07 ILE A:164 A:164 4.0 0.023 E -120.4 144.2 4.0 0.023 0.0 HOH
 4.813
 CG2
 O
1p1b 1 P10868 90.4 1e-134 X-RAY
 2003-04-29 ILE A:128 A:164 7.0 0.04 E -116.3 136.4 7.0 0.04 0.0 HOH
 5.919
 N
 O
ILE B:128 B:164 9.0 0.051 E -116.9 138.6 9.0 0.051 0.0 HOH
 7.642
 CD1
 O
ILE C:128 C:164 9.0 0.051 E -115.9 136.7 NA NA NA
ILE D:128 D:164 8.0 0.046 E -115.5 136.9 NA NA NA
1p1c 1 P10868 90.4 1e-134 X-RAY
 2003-04-29 ILE A:128 A:164 5.0 0.029 E -111.5 133.6 5.0 0.029 0.0 HOH
 5.854
 N
 O
ILE B:128 B:164 5.0 0.029 E -124.4 131.9 5.0 0.029 0.0 HOH
 6.160
 N
 O
1khh 1 P10868 90.36 8e-134 X-RAY
 2001-12-12 ILE A:127 A:164 7.0 0.04 E -118.2 138.7 7.0 0.04 0.0 HOH
 5.447
 N
 O
ILE B:127 B:164 7.0 0.04 E -120.2 137.5 7.0 0.04 0.0 HOH
 7.385
 CD1
 O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q14353-f1 1 Q14353 100.0 1e-180 VAL A:165 A:165 4.0 0.026 E -113.6 125.9