Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr19 1399004 . T A CCDS12064.1:NM_000156.5:c.481Aag>Tag_NP_000147.1:p.161K>* Homo sapiens guanidinoacetate N-methyltransferase (GAMT), transcript variant 1, mRNA.
pdb_id: 
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alphafold_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
3orh 1 Q14353 100.0 3e-180 X-RAY
 2010-09-15 LYS A:161 A:161 64.0 0.32 E -75.8 158.8 64.0 0.32 0.0 HOH
 2.611
 NZ
 O
LYS B:161 B:161 63.0 0.315 E -75.5 158.4 NA NA NA
LYS C:161 C:161 63.0 0.315 E -75.6 158.5 NA NA NA
LYS D:161 D:161 63.0 0.315 E -75.6 158.5 NA NA NA
1xcj 1 P10868 87.18 6e-156 X-RAY
 2004-12-07 LYS A:160 A:160 82.0 0.41 E -74.2 158.6 82.0 0.41 0.0 HOH
 4.746
 NZ
 O
1xcl 1 P10868 87.18 6e-156 X-RAY
 2004-12-07 LYS A:160 A:160 86.0 0.43 E -75.3 156.4 86.0 0.43 0.0 HOH
 3.173
 CG
 O
1p1b 1 P10868 90.4 1e-134 X-RAY
 2003-04-29 LYS A:124 A:160 55.0 0.275 E -79.6 155.7 55.0 0.275 0.0 HOH
 4.587
 CB
 O
LYS B:124 B:160 54.0 0.27 E -79.8 156.0 54.0 0.27 0.0
LYS C:124 C:160 56.0 0.28 E -80.4 155.1 NA NA NA
LYS D:124 D:160 56.0 0.28 E -80.8 153.5 NA NA NA
1p1c 1 P10868 90.4 1e-134 X-RAY
 2003-04-29 LYS A:124 A:160 56.0 0.28 E -77.4 154.1 56.0 0.28 0.0 HOH
 3.876
 CD
 O
LYS B:124 B:160 48.0 0.24 E -78.4 146.5 48.0 0.24 0.0 HOH
 4.333
 CB
 O
1khh 1 P10868 90.36 8e-134 X-RAY
 2001-12-12 LYS A:123 A:160 49.0 0.245 E -76.4 150.9 49.0 0.245 0.0 HOH
 3.696
 CB
 O
LYS B:123 B:160 50.0 0.25 E -80.7 148.0 50.0 0.25 0.0 HOH
 6.455
 N
 O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q14353-f1 1 Q14353 100.0 1e-180 LYS A:161 A:161 58.0 0.29 E -68.0 156.2