Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr19 1399154 . C A CCDS12064.1:NM_000156.5:c.432tgG>tgT_NP_000147.1:p.144W>C Homo sapiens guanidinoacetate N-methyltransferase (GAMT), transcript variant 1, mRNA.
pdb_id: 
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auth_asym_id: 
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alphafold_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
3orh 1 Q14353 100.0 3e-180 X-RAY
 2010-09-15 TRP A:144 A:144 31.0 0.122 T -49.5 -50.9 31.0 0.122 0.0 HOH
 3.373
 CH2
 O
TRP B:144 B:144 24.0 0.094 T -43.5 -55.0 NA NA NA
TRP C:144 C:144 22.0 0.086 T -47.5 -52.1 NA NA NA
TRP D:144 D:144 63.0 0.247 T -47.7 -52.7 NA NA NA
1xcj 1 P10868 87.18 6e-156 X-RAY
 2004-12-07 TRP A:143 A:143 27.0 0.106 T -46.2 -45.6 27.0 0.106 0.0 NMG
HOH
 6.860
3.172
 O
CH2
 O1
O
1xcl 1 P10868 87.18 6e-156 X-RAY
 2004-12-07 TRP A:143 A:143 27.0 0.106 T -49.5 -47.6 27.0 0.106 0.0 HOH
 3.113
 CH2
 O
1p1b 1 P10868 90.4 1e-134 X-RAY
 2003-04-29 TRP A:107 A:143 60.0 0.235 T -34.4 -56.4 13.0 0.051 0.184 B:P10868:0.184
 HOH
 3.324
 CH2
 O
TRP B:107 B:143 97.0 0.38 T -59.5 -62.6 15.0 0.059 0.321 A:P10868:0.322
 HOH
 3.382
 CB
 O
TRP C:107 C:143 59.0 0.231 T -34.5 -55.7 NA NA NA
TRP D:107 D:143 59.0 0.231 T -34.7 -56.6 NA NA NA
1p1c 1 P10868 90.4 1e-134 X-RAY
 2003-04-29 TRP A:107 A:143 80.0 0.314 T -48.9 -55.8 12.0 0.047 0.267 B:P10868:0.267
 GD3
HOH
 8.744
4.339
 CE3
CZ2
 GD
O
TRP B:107 B:143 105.0 0.412 T -42.2 -52.2 12.0 0.047 0.365 A:P10868:0.365
 HOH
 4.815
 NE1
 O
1khh 1 P10868 90.36 8e-134 X-RAY
 2001-12-12 TRP A:106 A:143 88.0 0.345 T -48.8 -52.6 11.0 0.043 0.302 B:P10868:0.302
 HOH
 3.498
 CG
 O
TRP B:106 B:143 93.0 0.365 T -52.2 -50.3 9.0 0.035 0.33 A:P10868:0.329
 HOH
 6.914
 CD1
 O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q14353-f1 1 Q14353 100.0 1e-180 TRP A:144 A:144 30.0 0.118 T -53.1 -46.7