Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr19 1399167 . G A CCDS12064.1:NM_000156.5:c.419tCg>tTg_NP_000147.1:p.140S>L Homo sapiens guanidinoacetate N-methyltransferase (GAMT), transcript variant 1, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
3orh 1 Q14353 100.0 3e-180 X-RAY
 2010-09-15 SER A:140 A:140 10.0 0.087 B -154.4 151.8 10.0 0.087 0.0 SAH
HOH
 8.447
2.674
 N
OG
 N7
O
SER B:140 B:140 17.0 0.148 B -156.0 156.9 NA NA NA
SER C:140 C:140 15.0 0.13 B -151.7 155.9 NA NA NA
SER D:140 D:140 53.0 0.461 S -144.0 154.0 NA NA NA
1xcj 1 P10868 87.18 6e-156 X-RAY
 2004-12-07 SER A:139 A:139 18.0 0.157 B -156.4 154.6 18.0 0.157 0.0 SAH
HOH
 8.163
4.019
 N
CB
 N7
O
1xcl 1 P10868 87.18 6e-156 X-RAY
 2004-12-07 SER A:139 A:139 19.0 0.165 B -135.9 165.3 19.0 0.165 0.0 SAH
HOH
 8.175
3.231
 N
OG
 N7
O
1p1b 1 P10868 90.4 1e-134 X-RAY
 2003-04-29 SER A:103 A:139 33.0 0.287 -99.9 170.3 15.0 0.13 0.157 B:P10868:0.157
 HOH
 7.214
 O
 O
SER B:103 B:139 37.0 0.322 S -164.9 166.0 23.0 0.2 0.122 A:P10868:0.122
 SAH
HOH
 8.659
3.686
 N
CB
 N7
O
SER C:103 C:139 36.0 0.313 S -103.0 174.1 NA NA NA
SER D:103 D:139 36.0 0.313 S -102.9 173.0 NA NA NA
1p1c 1 P10868 90.4 1e-134 X-RAY
 2003-04-29 SER A:103 A:139 44.0 0.383 S -100.6 155.0 42.0 0.365 0.018 B:P10868:0.017
 SAH
GD3
HOH
 9.690
4.995
3.945
 N
CB
CB
 N7
GD
O
SER B:103 B:139 48.0 0.417 S -127.3 170.6 30.0 0.261 0.156 A:P10868:0.157
 SAH
HOH
 8.510
6.634
 N
CB
 N7
O
1khh 1 P10868 90.36 8e-134 X-RAY
 2001-12-12 SER A:102 A:139 46.0 0.4 S -58.7 147.9 35.0 0.304 0.096 B:P10868:0.096
 SAH
HOH
 9.557
3.408
 N
OG
 N7
O
SER B:102 B:139 48.0 0.417 S -58.9 151.9 35.0 0.304 0.113 A:P10868:0.113
 SAH
HOH
 9.514
7.010
 N
N
 N7
O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q14353-f1 1 Q14353 100.0 1e-180 SER A:140 A:140 10.0 0.087 B -154.4 159.7