Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr19 1399564 . C A CCDS12064.1:NM_000156.5:c.350tGg>tTg_NP_000147.1:p.117W>L Homo sapiens guanidinoacetate N-methyltransferase (GAMT), transcript variant 1, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
3orh 1 Q14353 100.0 3e-180 X-RAY
 2010-09-15 TRP A:117 A:117 9.0 0.035 H -58.6 -27.5 9.0 0.035 0.0 SAH
HOH
 3.039
3.575
 N
NE1
 N1
O
TRP B:117 B:117 9.0 0.035 H -60.0 -26.6 NA NA NA
TRP C:117 C:117 8.0 0.031 H -58.7 -27.2 NA NA NA
TRP D:117 D:117 9.0 0.035 H -59.6 -27.2 NA NA NA
1xcj 1 P10868 87.18 6e-156 X-RAY
 2004-12-07 TRP A:116 A:116 12.0 0.047 H -62.6 -30.0 12.0 0.047 0.0 SAH
HOH
 3.139
2.962
 N
NE1
 N1
O
1xcl 1 P10868 87.18 6e-156 X-RAY
 2004-12-07 TRP A:116 A:116 12.0 0.047 H -63.5 -28.0 12.0 0.047 0.0 SAH
HOH
 3.151
3.115
 N
NE1
 N1
O
1p1b 1 P10868 90.4 1e-134 X-RAY
 2003-04-29 TRP A:80 A:116 11.0 0.043 H -59.9 -21.0 11.0 0.043 0.0 SAH
HOH
 2.846
8.955
 N
O
 N1
O
TRP B:80 B:116 18.0 0.071 H -57.5 -22.6 18.0 0.071 0.0 SAH
HOH
 2.885
3.377
 N
NE1
 N1
O
TRP C:80 C:116 10.0 0.039 H -58.6 -22.6 NA NA NA
TRP D:80 D:116 12.0 0.047 H -58.0 -23.4 NA NA NA
1p1c 1 P10868 90.4 1e-134 X-RAY
 2003-04-29 TRP A:80 A:116 13.0 0.051 H -67.8 -27.1 13.0 0.051 0.0 SAH
HOH
 3.059
4.268
 N
CH2
 N1
O
TRP B:80 B:116 14.0 0.055 H -64.5 -22.3 14.0 0.055 0.0 SAH
HOH
 3.103
4.364
 N
CZ3
 N1
O
1khh 1 P10868 90.36 8e-134 X-RAY
 2001-12-12 TRP A:79 A:116 12.0 0.047 H -59.2 -25.9 12.0 0.047 0.0 SAH
HOH
 3.196
4.664
 N
CH2
 N1
O
TRP B:79 B:116 11.0 0.043 H -59.2 -26.0 11.0 0.043 0.0 SAH
HOH
 3.185
3.809
 N
CH2
 N1
O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q14353-f1 1 Q14353 100.0 1e-180 TRP A:117 A:117 24.0 0.094 H -63.5 -28.3