Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr19 1399792 . C A CCDS12064.1:NM_000156.5:c.327aaG>aaT_NP_000147.1:p.109K>N Homo sapiens guanidinoacetate N-methyltransferase (GAMT), transcript variant 1, mRNA.
pdb_id: 
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alphafold_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
3orh 1 Q14353 100.0 3e-180 X-RAY
 2010-09-15 LYS A:109 A:109 161.0 0.805 E -49.6 124.3 161.0 0.805 0.0 HOH
 2.931
 N
 O
LYS B:109 B:109 169.0 0.845 E -48.5 121.4 NA NA NA
LYS C:109 C:109 157.0 0.785 E -51.2 122.6 NA NA NA
LYS D:109 D:109 159.0 0.795 E -49.2 123.1 NA NA NA
1xcj 1 P10868 87.18 6e-156 X-RAY
 2004-12-07 LYS A:108 A:108 137.0 0.685 E -44.0 129.2 137.0 0.685 0.0
1xcl 1 P10868 87.18 6e-156 X-RAY
 2004-12-07 LYS A:108 A:108 123.0 0.615 E -48.3 123.0 123.0 0.615 0.0 HOH
 3.172
 NZ
 O
1p1b 1 P10868 90.4 1e-134 X-RAY
 2003-04-29 LYS A:72 A:108 133.0 0.665 -26.9 108.6 133.0 0.665 0.0 HOH
 4.546
 N
 O
LYS B:72 B:108 137.0 0.685 -29.1 107.0 137.0 0.685 0.0 HOH
 3.662
 N
 O
LYS C:72 C:108 135.0 0.675 -25.7 109.5 NA NA NA
LYS D:72 D:108 134.0 0.67 -25.3 107.9 NA NA NA
1p1c 1 P10868 90.4 1e-134 X-RAY
 2003-04-29 LYS A:72 A:108 125.0 0.625 E -54.5 128.7 125.0 0.625 0.0 HOH
 3.534
 N
 O
LYS B:72 B:108 136.0 0.68 -48.6 121.0 136.0 0.68 0.0 HOH
 2.670
 NZ
 O
1khh 1 P10868 90.36 8e-134 X-RAY
 2001-12-12 LYS A:71 A:108 127.0 0.635 E -50.2 118.2 127.0 0.635 0.0 HOH
 3.385
 N
 O
LYS B:71 B:108 129.0 0.645 E -48.8 119.1 129.0 0.645 0.0 HOH
 9.837
 N
 O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q14353-f1 1 Q14353 100.0 1e-180 LYS A:109 A:109 121.0 0.605 E -63.7 119.0