Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr19 1399813 . C A CCDS12064.1:NM_000156.5:c.306tgG>tgT_NP_000147.1:p.102W>C Homo sapiens guanidinoacetate N-methyltransferase (GAMT), transcript variant 1, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
3orh 1 Q14353 100.0 3e-180 X-RAY
 2010-09-15 TRP A:102 A:102 11.0 0.043 H -76.2 -42.6 11.0 0.043 0.0 SAH
HOH
 9.365
3.123
 NE1
NE1
 OXT
O
TRP B:102 B:102 36.0 0.141 H -76.3 -42.6 NA NA NA
TRP C:102 C:102 32.0 0.125 H -76.1 -42.4 NA NA NA
TRP D:102 D:102 5.0 0.02 H -76.8 -42.3 NA NA NA
1xcj 1 P10868 87.18 6e-156 X-RAY
 2004-12-07 TRP A:101 A:101 26.0 0.102 H -70.6 -46.9 26.0 0.102 0.0 SAH
HOH
 9.129
6.167
 NE1
CD1
 OXT
O
1xcl 1 P10868 87.18 6e-156 X-RAY
 2004-12-07 TRP A:101 A:101 19.0 0.075 H -69.5 -47.3 19.0 0.075 0.0 SAH
HOH
 9.225
3.328
 NE1
CZ3
 OXT
O
1p1b 1 P10868 90.4 1e-134 X-RAY
 2003-04-29 TRP A:65 A:101 30.0 0.118 H -57.7 -45.4 30.0 0.118 0.0 SAH
HOH
 9.512
3.905
 CZ2
CD1
 OXT
O
TRP B:65 B:101 29.0 0.114 H -56.1 -47.6 29.0 0.114 0.0 SAH
HOH
 9.638
4.812
 CZ2
CD1
 OXT
O
TRP C:65 C:101 30.0 0.118 H -58.6 -45.3 NA NA NA
TRP D:65 D:101 30.0 0.118 H -57.8 -46.5 NA NA NA
1p1c 1 P10868 90.4 1e-134 X-RAY
 2003-04-29 TRP A:65 A:101 30.0 0.118 H -60.4 -42.1 30.0 0.118 0.0 SAH
HOH
 9.290
3.164
 NE1
N
 OXT
O
TRP B:65 B:101 23.0 0.09 H -62.1 -50.7 23.0 0.09 0.0 SAH
HOH
 9.681
4.203
 NE1
N
 OXT
O
1khh 1 P10868 90.36 8e-134 X-RAY
 2001-12-12 TRP A:64 A:101 24.0 0.094 H -63.6 -41.9 24.0 0.094 0.0 SAH
HOH
 9.454
4.498
 NE1
CD1
 OXT
O
TRP B:64 B:101 25.0 0.098 H -63.9 -43.9 25.0 0.098 0.0 SAH
HOH
 9.474
3.100
 NE1
NE1
 OXT
O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q14353-f1 1 Q14353 100.0 1e-180 TRP A:102 A:102 17.0 0.067 H -80.0 -43.1