Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr19 1399877 . G A CCDS12064.1:NM_000156.5:c.242gCg>gTg_NP_000147.1:p.81A>V Homo sapiens guanidinoacetate N-methyltransferase (GAMT), transcript variant 1, mRNA.
pdb_id: 
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alphafold_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
3orh 1 Q14353 100.0 3e-180 X-RAY
 2010-09-15 ALA A:81 A:81 18.0 0.157 S -87.6 155.2 18.0 0.157 0.0 HOH
 3.256
 C
 O
ALA B:81 B:81 17.0 0.148 S -87.8 154.1 NA NA NA
ALA C:81 C:81 16.0 0.139 S -88.7 154.7 NA NA NA
ALA D:81 D:81 16.0 0.139 S -87.2 154.1 NA NA NA
1xcj 1 P10868 87.18 6e-156 X-RAY
 2004-12-07 ALA A:80 A:80 12.0 0.104 S -82.0 159.3 12.0 0.104 0.0 HOH
 4.170
 CB
 O
1xcl 1 P10868 87.18 6e-156 X-RAY
 2004-12-07 ALA A:80 A:80 12.0 0.104 S -92.8 164.8 12.0 0.104 0.0 HOH
 4.802
 CB
 O
1p1b 1 P10868 90.4 1e-134 X-RAY
 2003-04-29 ALA A:44 A:80 11.0 0.096 S -130.3 157.2 11.0 0.096 0.0 HOH
 7.683
 O
 O
ALA B:44 B:80 10.0 0.087 S -127.6 157.6 10.0 0.087 0.0 HOH
 8.286
 O
 O
ALA C:44 C:80 9.0 0.078 S -129.6 156.9 NA NA NA
ALA D:44 D:80 11.0 0.096 S -133.7 156.1 NA NA NA
1p1c 1 P10868 90.4 1e-134 X-RAY
 2003-04-29 ALA A:44 A:80 11.0 0.096 S -104.4 164.3 11.0 0.096 0.0 HOH
 3.125
 O
 O
ALA B:44 B:80 10.0 0.087 S -99.3 169.2 10.0 0.087 0.0 HOH
 4.643
 CB
 O
1khh 1 P10868 90.36 8e-134 X-RAY
 2001-12-12 ALA A:43 A:80 9.0 0.078 S -104.7 161.8 9.0 0.078 0.0 HOH
 3.377
 C
 O
ALA B:43 B:80 10.0 0.087 S -104.0 161.8 10.0 0.087 0.0 HOH
 4.001
 CB
 O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q14353-f1 1 Q14353 100.0 1e-180 ALA A:81 A:81 14.0 0.122 S -87.4 154.3