Variant
Genome | Chromosome | Position | VCF ID | Ref | Alt | mRNA Change | mRNA Info | GRCh37 | chr19 | 1399884 | . | G | A | CCDS12064.1:NM_000156.5:c.235Cag>Tag_NP_000147.1:p.79Q>* | Homo sapiens guanidinoacetate N-methyltransferase (GAMT), transcript variant 1, mRNA. |
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PDB
Entity | Residue | Monomer | BioUnit | Ligand | View | ||||||||||||||||||
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PDB | Entity | Uniprot | Identity | Evalue | ExpMethod | Date | Name | Label | Auth | ASA | rASA | SS | φ | ψ | ASA | rASA | ΔASA | Interaction | Name | Distance | Atom(p) | Atom(l) | |
3orh | 1 | Q14353 | 100.0 | 3e-180 |
X-RAY |
2010-09-15 | GLN | A:79 | A:79 | 11.0 | 0.061 | T | -63.8 | -20.0 | 11.0 | 0.061 | 0.0 |
HOH |
2.980 |
O |
O |
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GLN | B:79 | B:79 | 12.0 | 0.067 | T | -64.2 | -18.8 | NA | NA | NA | |||||||||||||
GLN | C:79 | C:79 | 12.0 | 0.067 | T | -64.7 | -19.2 | NA | NA | NA | |||||||||||||
GLN | D:79 | D:79 | 12.0 | 0.067 | T | -64.4 | -19.2 | NA | NA | NA | |||||||||||||
1xcj | 1 | P10868 | 87.18 | 6e-156 |
X-RAY |
2004-12-07 | GLN | A:78 | A:78 | 5.0 | 0.028 | H | -63.8 | -20.5 | 5.0 | 0.028 | 0.0 |
HOH |
7.453 |
C |
O |
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1xcl | 1 | P10868 | 87.18 | 6e-156 |
X-RAY |
2004-12-07 | GLN | A:78 | A:78 | 5.0 | 0.028 | T | -68.3 | -16.5 | 5.0 | 0.028 | 0.0 |
HOH |
6.014 |
OE1 |
O |
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1p1b | 1 | P10868 | 90.4 | 1e-134 |
X-RAY |
2003-04-29 | GLN | A:42 | A:78 | 2.0 | 0.011 | H | -59.1 | -20.8 | 2.0 | 0.011 | 0.0 |
HOH |
7.361 |
NE2 |
O |
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GLN | B:42 | B:78 | 3.0 | 0.017 | H | -59.0 | -24.5 | 3.0 | 0.017 | 0.0 |
HOH |
6.597 |
OE1 |
O |
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GLN | C:42 | C:78 | 2.0 | 0.011 | T | -59.7 | -19.6 | NA | NA | NA | |||||||||||||
GLN | D:42 | D:78 | 2.0 | 0.011 | H | -59.2 | -21.6 | NA | NA | NA | |||||||||||||
1p1c | 1 | P10868 | 90.4 | 1e-134 |
X-RAY |
2003-04-29 | GLN | A:42 | A:78 | 4.0 | 0.022 | T | -62.1 | -10.5 | 4.0 | 0.022 | 0.0 |
HOH |
3.132 |
O |
O |
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GLN | B:42 | B:78 | 8.0 | 0.044 | T | -64.8 | -2.0 | 8.0 | 0.044 | 0.0 |
HOH |
3.429 |
O |
O |
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1khh | 1 | P10868 | 90.36 | 8e-134 |
X-RAY |
2001-12-12 | GLN | A:41 | A:78 | 7.0 | 0.039 | T | -65.2 | -13.6 | 7.0 | 0.039 | 0.0 |
HOH |
3.038 |
O |
O |
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GLN | B:41 | B:78 | 6.0 | 0.033 | T | -63.6 | -11.6 | 6.0 | 0.033 | 0.0 |
HOH |
3.778 |
O |
O |
AlphaFold DB
Entity | Residue | Monomer | View | ||||||||||
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ID | Entity | Uniprot | Identity | Evalue | Name | Label | Auth | ASA | rASA | SS | φ | ψ | |
af-q14353-f1 | 1 | Q14353 | 100.0 | 1e-180 | GLN | A:79 | A:79 | 6.0 | 0.033 | T | -69.8 | -9.3 |